AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03217 | ATGGCATCCGCCTTTCTTTCGAGAACTCTCTTTGCAAATCGTTCCGTTTCATCTTTCGCTCGCAATCAAAACCCCCAAAAATTGGCCTCCTTTTTATTTAAGAAACCCCTTCAATCGTGGTCTTCCGGATCTCGTACCGCTTATATGAGTACTTCCTCAATTCGTAGCAAAATGGCTTCAACCGCGGTTGGATCTACAGCTACTTTTTCAACACAGTCAGTGCCGACTACCGAACCGGTTGTTTCAGTTGATTGGCTCCATGCCAATCTGCGTGGGCCTGATATCAAGGTGTTGGATGCATCCTGGTACATGCCTGATGAACAGAGAAACCCACTTCAAGAGTATCAGGTTGCCCACATTCCTGGTGCTCTTTTCTTTGATGTAGATGGGATATCAGACCGAACCACCAATCTGCCACACATGTTGCCATCTGAGGAAGCATTTGCTGCTGCCGTTTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTTGTTTATGATGGCAAAGGGATCTTTAGTGCCGCTCGTGTTTGGTGGATGTTCCGAGTTTTTGGACACGATAGAGTATGGGTATTAGATGGAGGCCTCCCCAGATGGCGTGCTTCGGGATTTGACGTTGAATCTAGTGCTTCTAGTGACGCGATATTGAAGGCAAGTGCTGCAAGTGAGGCAATAGAAAAAGTATACCATGGGCAGGCGGTTGGTCCAGTCACGTTTCTAACAAAATATCAACCACATCTTGTATGGACACTTGAACAGGTTAAAAAGAATTTGGAGGAACAAACACATCAACATATAGATGCGCGGTCAAAGGCCAGGTTTGATGGTGTTGCGGCTGAGCCTCGTAAAGGAATAAGAAGTGGCCATGTGCCCGGGAGTAAGTGTGTTCCTTTTCCGCAGATGTTAGATGGCTCACAGACACTGCTACCAGCAGACCAGCTTAAGAAAAAGTTTGAAGAAGAGGGAATCTCATTGGACAACCCCGTTGTTACTTCATGTGGCACCGGAGTTACTGCTTGCATTCTTGCATTGGGACTCCATCGACTTGGGAAGACCGATGCTCCGGTTTACGATGGCTCTTGGACCGAATGGGGAGCACAAGAGGATACTCCCGTTTCAACTTCAACTCCAACTTCTTAA | 1140 | 46.75 | MASAFLSRTLFANRSVSSFARNQNPQKLASFLFKKPLQSWSSGSRTAYMSTSSIRSKMASTAVGSTATFSTQSVPTTEPVVSVDWLHANLRGPDIKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASSDAILKASAASEAIEKVYHGQAVGPVTFLTKYQPHLVWTLEQVKKNLEEQTHQHIDARSKARFDGVAAEPRKGIRSGHVPGSKCVPFPQMLDGSQTLLPADQLKKKFEEEGISLDNPVVTSCGTGVTACILALGLHRLGKTDAPVYDGSWTEWGAQEDTPVSTSTPTS | 379 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03217 | 379 | Coils | Coil | 251 | 271 | - | - | |
| Ceso2g03217 | 379 | CDD | TST-Repeat-2 | 250 | 366 | - | - | |
| Ceso2g03217 | 379 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 252 | 377 | IPR036873 | - | |
| Ceso2g03217 | 379 | SMART | rhod-4 | 81 | 205 | IPR001763 | - | |
| Ceso2g03217 | 379 | SMART | rhod-4 | 249 | 370 | IPR001763 | - | |
| Ceso2g03217 | 379 | FunFam | Sulfurtransferase | 73 | 215 | - | - | |
| Ceso2g03217 | 379 | Gene3D | - | 244 | 371 | IPR036873 | - | |
| Ceso2g03217 | 379 | CDD | TST-Repeat-1 | 80 | 203 | - | - | |
| Ceso2g03217 | 379 | PANTHER | THIOSULFATE SULFERTANSFERASE | 76 | 376 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Ceso2g03217 | 379 | FunFam | Sulfurtransferase | 244 | 375 | - | - | |
| Ceso2g03217 | 379 | Pfam | Rhodanese-like domain | 82 | 201 | IPR001763 | - | |
| Ceso2g03217 | 379 | Pfam | Rhodanese-like domain | 250 | 366 | IPR001763 | - | |
| Ceso2g03217 | 379 | ProSitePatterns | Rhodanese C-terminal signature. | 354 | 364 | IPR001307 | GO:0004792(InterPro) | |
| Ceso2g03217 | 379 | ProSiteProfiles | Rhodanese domain profile. | 91 | 208 | IPR001763 | - | |
| Ceso2g03217 | 379 | ProSiteProfiles | Rhodanese domain profile. | 259 | 373 | IPR001763 | - | |
| Ceso2g03217 | 379 | Gene3D | - | 73 | 215 | IPR036873 | - | |
| Ceso2g03217 | 379 | ProSitePatterns | Rhodanese signature 1. | 115 | 126 | IPR001307 | GO:0004792(InterPro) | |
| Ceso2g03217 | 379 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 77 | 210 | IPR036873 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03217 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ceso7g01448 | . | 28 | 147 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 53.719 | 2.18e-41 | 137.0 | |
| Ceso7g02417 | . | 149 | 328 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 26.699 | 4.92e-07 | 52.8 | |
| Ceso6g00077 | . | 31 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 65.294 | 3.45e-80 | 239.0 | |
| Ceso6g03168 | . | 78 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 63.812 | 1.41e-174 | 494.0 | |
| Ceso6g02788 | . | 222 | 461 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 72.5 | 8.87e-125 | 361.0 | |
| Ceso3g01439 | . | 2 | 365 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 60.59 | 5.09e-135 | 409.0 | |
| Ceso3g03456 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 70.601 | 0.0 | 667.0 | |
| Ceso2g00287 | . | 1 | 291 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 59.317 | 1.33e-125 | 359.0 | |
| Ceso2g00825 | . | 96 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 34.021 | 2.25e-08 | 49.7 | |
| Ceso2g01099 | . | 345 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 32.743 | 1.33e-19 | 87.0 | |
| Ceso2g03217 | . | 1 | 374 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 71.883 | 0.0 | 569.0 | |
| Ceso1g00652 | . | 40 | 266 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 28.517 | 2.31e-13 | 69.7 | |
| Ceso1g03387 | . | 15 | 383 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 65.312 | 3.26e-170 | 479.0 |