AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03241 ATGGAACGATTGCGAGGTGGTGGTAATGATACTCAACAACTCGTTGATCCTCGAGATCCTAATCAACAACTTCGTTCGAATTCGAATTTGAATTTGAATTCGAATTCCACAGGTGGTACTGTATTTGATGCATCGCAGTATGCGTTCTTTGGAAATGAAGTTCTTGAAGAAGTTGAGTTGGGAGGTCTGGAAGATGAAGAGGAAGACCTTCCGGCATCCAAATTCGAGGAGGAAGAGTTTCAGTTGGAGCCAGAAGAGGGTGTGTTTCCAGTAATCGATGATCTTGCCACTACATTTTCAAAGCTTAACAAAGATGTCATGGGGACAAGTGTTGGAGTTTTTGGTGACCAATCCAGAGAAAATTCATCTGCTGCTGAATGGGCACAGGGAGGAGAATACACCAACTGGCTTGACCAGGATATTTTTGAAGCAGAAAGTGCTCAGGATAGCAATAGATGGTCAAATCCGTCATTTCCTCTTCAAGATGCATCGATGCTTATTCACAGAACATCTTCCTATCCTGAGAAACACCAACAGAATCTTAACCAGCAGCTGCACGATGAATCGAAGCTGTACCTCCACAGAACATCGTCTTATCCCGAACAGCACCAGCAACAGAACCTTAACCAGCACCTGCTAGACGAATCAAAGCATCTCCACCGAACATCGTCTTACCCCGAACAGCAACAACCGCACCTCCTCAATCAGCACCTGCATTTCTCTAGCGAGCCTGTCCCGGTTCCCAAATCTTCCTTCATTTCCTACCCTCCACCTGGCGGTGGGTCCCCTCAACCGTCAGCAAGCCACCAGTTACACCATCTTAACCCCCAGTTTCACAACCAGATGCCGCCATCTTTTTCGAACATATCTCCGATGTCGAACCCGCAGCTTCAGATGGGCGGGATGCCTCACGGGTCGCAATTTGGCGGGAATCTGCCCCAGTTTCGCCCTCCTGGTTCGTCGGTTAATAACCGGATGCCGAACCAGTGGACGGGTCAAAATAGTTTATATCCCGGAGACCAACCTGATCTTTCAAACGGGATGTTGCAACAGCAGCTCGCTCACAAGAACGTTTTCGGGATGGCGGGTCCCAGGGATCCGAGGCCGAGACCGATGCAGAAAGGTAGACCGGGTCAGAGATACCCGCAATCGGGATTTGACACCACTGGATGGCCACAGTTCAAGTCGAAATACATGACGGCTGACGAGATCGAAAACATTCTCCGAATGCAGCTTGCAGCCACACACAGTAACGATCCTTACGTCGATGATTACTATCACCAAGCTTGTTTAGCTAACAAATCGAGTGGTGCGAAGCTGAGGCACCATTTCTGCCCGACCCAACTGCGGGATTGCCCTCCGAGGGCTCGTGCCGCTAACGAGCCACATGCTTTTCTTCAGGTCGATGCTTTGGGACGGGTCTCATTTTCTTCGATTCGTCGGCCTCGCCCGCTACTCGAGGTCGACCCACCGAAGTCGTCCGCTAGCGGCAACACCGATCAGAAAATATTGGATAAACCGTTGGAGCAGGAGCCAATGCTAGCAGCTAGAGTCACCATCGAGGACGGGATTTGTCTTCTTTTGGACGTTGACGATATCGACCGCTTTCTTCAGTTCAATCAGCTCCAAGATGGCGGATCCCAATTAAGGCAAAGGCGGCAGGTTTTACTCGAGGGATTAGCGACATCGCTTCAGCTCGTTGACCTGCTCGGCAAGAACGGTCAAACGGTGGAGTTGACCCCGAAAGACGATCTTGTTTTCTTACGATTAGTTTCCCTCCCAAAGGGTCGAAAGCTTCTCGCGAGGTACCTCCAGCATCTCTCCCCGGGAAGCGAGCTGACCCGTATAGTCTGTATGGCGGTTTTCCGCCACTTACGATTCTTGTTCGGCGGACTTCCGTCGGATTCCGGAGCAGCAGCAACTGCCAACAATCTTGCAACAACCGTTTCGTCCTCTATCCGTGGGATGGAGCTGAGAGCCCTTGCTGCCTGTCTGGCGTCTGTCGTTTGTTCTACCGAGCACCCTCCACTTCGGCCTGTCGGAAGTCCGGCAGGCGACGGGGCTTCCGTCGTTATAAAATCCGTACTCGAAAGAGCGACCGAGCTCCTAACCGACCCACACGCAGTCAGCAACTGCAGCATGCCGAACCGGGCGTTTTGGCAGGCGTCTTTCGACGCCTTCTTTAGGCTTCTAACAAAATACTGTTTTAGCAAATACGACACCGTTGTCCAATCGTTGCTGACTCAGGGCGGCGGGCCCACCGACATGGCGGTTATCGCGCCGGAAGCCGCGAAAGCCGTCAGCCGGGAGATGCCGATCGAACTCCTGCGTGCGAGCCTCCCTCATACGAACGAAAACCAGCGGAAACTTTTGCTCGATTTTGCGCAACGTTCGACGCCTTTCGGAATGAATAGTGGCACTTGA 2424 51.82 MERLRGGGNDTQQLVDPRDPNQQLRSNSNLNLNSNSTGGTVFDASQYAFFGNEVLEEVELGGLEDEEEDLPASKFEEEEFQLEPEEGVFPVIDDLATTFSKLNKDVMGTSVGVFGDQSRENSSAAEWAQGGEYTNWLDQDIFEAESAQDSNRWSNPSFPLQDASMLIHRTSSYPEKHQQNLNQQLHDESKLYLHRTSSYPEQHQQQNLNQHLLDESKHLHRTSSYPEQQQPHLLNQHLHFSSEPVPVPKSSFISYPPPGGGSPQPSASHQLHHLNPQFHNQMPPSFSNISPMSNPQLQMGGMPHGSQFGGNLPQFRPPGSSVNNRMPNQWTGQNSLYPGDQPDLSNGMLQQQLAHKNVFGMAGPRDPRPRPMQKGRPGQRYPQSGFDTTGWPQFKSKYMTADEIENILRMQLAATHSNDPYVDDYYHQACLANKSSGAKLRHHFCPTQLRDCPPRARAANEPHAFLQVDALGRVSFSSIRRPRPLLEVDPPKSSASGNTDQKILDKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGGSQLRQRRQVLLEGLATSLQLVDLLGKNGQTVELTPKDDLVFLRLVSLPKGRKLLARYLQHLSPGSELTRIVCMAVFRHLRFLFGGLPSDSGAAATANNLATTVSSSIRGMELRALAACLASVVCSTEHPPLRPVGSPAGDGASVVIKSVLERATELLTDPHAVSNCSMPNRAFWQASFDAFFRLLTKYCFSKYDTVVQSLLTQGGGPTDMAVIAPEAAKAVSREMPIELLRASLPHTNENQRKLLLDFAQRSTPFGMNSGT 807
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03241 807 MobiDBLite consensus disorder prediction 14 37 - -
Ceso2g03241 807 MobiDBLite consensus disorder prediction 1 37 - -
Ceso2g03241 807 Pfam Topoisomerase II-associated protein PAT1 470 621 IPR019167 -
Ceso2g03241 807 MobiDBLite consensus disorder prediction 365 389 - -
Ceso2g03241 807 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 29 204 IPR039900 GO:0000290(InterPro)|GO:0000290(PANTHER)|GO:0000932(PANTHER)|GO:0003723(PANTHER)|GO:0033962(PANTHER)
Ceso2g03241 807 MobiDBLite consensus disorder prediction 241 271 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03241 K12617 DNA topoisomerase 2-associated protein PAT1
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:81590248 Ceso4g04002 Ceso-Chr4:90236963 dispersed