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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03258 ATGTCAAACCGAACCTTCTCAAGTTACGGGGAACTGCCATCTTCATCATCATCTTCATCATTCAGAAGTAGAATTGAAGAAATGGCAGCCACAATGATGTCTTCAGTAAGCCTAAAGCCTTCTCCATTCAGCATTCAGAAGCCAGCAGCCAAAGGCCTTCCTTCACTTGCAAGAACCTCCTTCAAGATTCAAGCCAGTGGTATCAAGAAGATCAAGACTGACAAGCCTTATGGAATTGGAGGAGGAATGCAATTGAGAGACGGTAAAGATGCCAACGGAAGAAAGCCAACGAGTGATGCAACTATCTTAGAACCAAAATCAAGTATTACTAGCACTCAAACTGTGATGAATAACTTGACTCAGGGAAAGGGAGTGTACCAATTTGTTGACAAGTACGGTGCTAACGTCGATGGATACAGTCCCATCTACAACGAAGAGGAATGGGCTCCAAGTGGTGATGTCTATGTTGGTGGCACAACTGGGTTGTTGATATGGGCTGTTACTTTGGCTGGAATTCTTGGAGGGGGTGCTCTTCTAGTTTACAGCACAAGTGCTTTGGCACAGTAA 567 44.44 MSNRTFSSYGELPSSSSSSSFRSRIEEMAATMMSSVSLKPSPFSIQKPAAKGLPSLARTSFKIQASGIKKIKTDKPYGIGGGMQLRDGKDANGRKPTSDATILEPKSSITSTQTVMNNLTQGKGVYQFVDKYGANVDGYSPIYNEEEWAPSGDVYVGGTTGLLIWAVTLAGILGGGALLVYSTSALAQ 188
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03258 188 PANTHER PHOTOSYSTEM II 10 KDA POLYPEPTIDE, CHLOROPLASTIC 28 97 IPR006814 GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0042651(InterPro)
Ceso2g03258 188 Pfam Photosystem II 10 kDa polypeptide PsbR 119 187 IPR006814 GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0042651(InterPro)
Ceso2g03258 188 Pfam Photosystem II 10 kDa polypeptide PsbR 66 97 IPR006814 GO:0009523(InterPro)|GO:0009654(InterPro)|GO:0015979(InterPro)|GO:0042651(InterPro)
Ceso2g03258 188 MobiDBLite consensus disorder prediction 82 101 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03258 K03541 photosystem II 10kDa protein