AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03262 ATGGATCATAAGAAAAGAACCACCACCTCCGCCTCCACCTCCACCTCCACCTCCACCTCCGCCGTCGTAGGCGGCGATAGCTTACTGGAAACCATACCGGAAAGCATCCTGAATGAAATCTTGTTGAGGTTAGAAGAACCGGAGACACTCACCACGCTTTGCTCGGTATCCTGCGTTTCACGAACGCTTCACTCCTCCGTCAACAAACTTCTCTCCTCCTTCTCATCCATCGATCTCTCCGCGTTTTCGGTCGATTCTCGGACATTTGGCGGAATCATTAGAAGGTTCGGGAAGATCGAGAAGATCACCTTAGATTGCCTCCGTCTGAATGATTCTTCAATCAGAAGGTTTCTCGGACCACATGTTGAGGAATTGATTTTGTTGAAATGTTCTTCGCTCTCTTACAAACTTCTTTCTAGCATTGGAAGAACTTGTCCAAATTTAAGAGTGCTTACGCTGGAGTTTTCTGGCTTTATTAACAAGTCTAAAGTATTCGATTTGAACCTTGAAGGCTCACTTGGAAGTTGTCAATTCTTGGAGTCGGTACAAATCAAAGTTCGTGGAGGTGAAATCAACGAATATGGCTTTATGTTGCTCGGTATCTACCATTTGCTCCCCAAAACCGTCAAGATTCTTAAACTCCAACCAGCTAGTGCCTTAGAAGCTCTTGTTTACTTTAGAACACTTCAGCCAGCCAATCTTGGAGTCCCGATTGCACCCACAACTTTCGGACAGACGTTAACACACATATCATTAGTCTTGGATAGCATCACCGATGTCCTTATCCGCACCATTACCCACGCCCTTCCCCTATTGGCTGAACTTGATCTTAAAGACCGACCAACGTCTGAACCATCTGATGACTTATCCGACATAGGGATTCAGTCGCTACTCTGTTGTCGCCATCTGACCAGCCTCTCTCTTTCCCGAAGCCGCCAACATATCATCACCCCGTTCAAAAGAATAACCGATATGGGCATGTTTTTGCTCTCGGAAGGGTGCAAAGGGCTAGAATCCATTCGGCTTAACGGGTTTTCTAAAATCAGTGACGCCGGGTTCACTTCGATTCTGAACTCATGTCTGAACCTGAAAAAGTTCGACATTCGGCACGCTTCCCTTTTGACCGACCTAGCGTTCCAAGATATCAGTAAGGTCCCTAGGTCTCTTACAGACGTTAAATTAGTCTCATGTGGTTATATAACCAGCGAAGCCGTCCGTGAGCTGGCCTCTTGTCGTGATCTCGAGACGCTCGATCTGCTCGGGTGCAGAAGCGTGGCTGATTCGTGTCTTAATGACGTCTCGCGTCTTAAGTTCCTGACCTTGTTAAACTTAGGTGGATCAGACGTCACCGATGACGGTATGTTCGTTTTAGGTCACGGGAACGCTCCGATTTCGACTTTGTCTTTACGAGGCTGCAAAAGGGTAACTGATAAGGGGATCGAATTTTTGAAAACGGGAAAAAGTTTATCGTCTCTCGATCTTGGTCATATACCCTGGATAACGAACAATGCCATTAAGACGATTGTTGATGGTTCTTTTGGGCTTATTGAGTTGTGCATTAGGAATTGTTTTCATATAACTGATACGGCCATGGAGTTTTTGGGCTTAATGGGTAGGAGATCTGGAGGTGAAAGTAGAGGTCTAAGAAGGCTTGATGTCTATAATTGCAGTGCGTTATCGGCTGAATGTTTAGGATTGTTGAAAAAGCCTTTGTTTTGTGGGTTACAATGGATTGGAATTGGAGAGACTAAATTGATTTGTGGAGATGGAGAGTTGGATGAGATTCAGAAGGAAAGAAAATGGTTGACTATTTGTAGTGATGGGTGTGAGATGGGGTGTCATGATGGATGGCAATATCATAAGTTTGGAGTTTAA 1875 45.07 MDHKKRTTTSASTSTSTSTSAVVGGDSLLETIPESILNEILLRLEEPETLTTLCSVSCVSRTLHSSVNKLLSSFSSIDLSAFSVDSRTFGGIIRRFGKIEKITLDCLRLNDSSIRRFLGPHVEELILLKCSSLSYKLLSSIGRTCPNLRVLTLEFSGFINKSKVFDLNLEGSLGSCQFLESVQIKVRGGEINEYGFMLLGIYHLLPKTVKILKLQPASALEALVYFRTLQPANLGVPIAPTTFGQTLTHISLVLDSITDVLIRTITHALPLLAELDLKDRPTSEPSDDLSDIGIQSLLCCRHLTSLSLSRSRQHIITPFKRITDMGMFLLSEGCKGLESIRLNGFSKISDAGFTSILNSCLNLKKFDIRHASLLTDLAFQDISKVPRSLTDVKLVSCGYITSEAVRELASCRDLETLDLLGCRSVADSCLNDVSRLKFLTLLNLGGSDVTDDGMFVLGHGNAPISTLSLRGCKRVTDKGIEFLKTGKSLSSLDLGHIPWITNNAIKTIVDGSFGLIELCIRNCFHITDTAMEFLGLMGRRSGGESRGLRRLDVYNCSALSAECLGLLKKPLFCGLQWIGIGETKLICGDGELDEIQKERKWLTICSDGCEMGCHDGWQYHKFGV 624
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03262 624 MobiDBLite consensus disorder prediction 1 21 - -
Ceso2g03262 624 SMART LRR-CC-2 360 385 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 386 411 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 512 537 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 461 485 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 334 359 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 119 144 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 486 511 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 436 460 IPR006553 -
Ceso2g03262 624 SMART LRR-CC-2 300 333 IPR006553 -
Ceso2g03262 624 Gene3D Ribonuclease Inhibitor 461 573 IPR032675 -
Ceso2g03262 624 Gene3D Ribonuclease Inhibitor 88 460 IPR032675 -
Ceso2g03262 624 SUPERFAMILY RNI-like 62 311 - -
Ceso2g03262 624 Pfam Leucine Rich repeat 438 457 IPR001611 GO:0005515(InterPro)
Ceso2g03262 624 SUPERFAMILY RNI-like 323 588 - -
Ceso2g03262 624 PANTHER UNCHARACTERIZED 411 571 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03262 - -