AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03284 ATGATCCGTGAAGACGAAGGCTTTGCAAATTATCCTTTTGATGAAAGTTGGGTTACAACTGATGATATCGAAGTAGATATATCCGAAGAAGAACGAGCACAAAACGTCAACGAAGACTTCGCCGGAATCCTACGAACTAAACTCCCCGAGACTTTACAAAACCCTAGCGGCGGCGGCGCCATTGATAAACCTCCAAATCACCATAACAATAAAGCTTCAATAACTCAGGTTTTCCAACATTCGAAGTTTTCATGGCCACCTGCTATCCACGTTTCTGGCAGTAGGAAAAAGAAAAGTAGAAAAATGTTGGAGAGCAGATTGATTGCGATTGTAAGGAGGGGGAAATCGATTAATCAGATACGCTCGTCGTTTTCTTCGTCTCACGGAGGAGGATCGACGAATGTTTATAGTCGGTTCGGTTTCAATCATTGTTATTCGACGACTTATAAGCATGTTGTTAATCCCGTTGCTAGAAGGTGTTTGTTCGATGGCTTTCGGTCGGTGCACAATCTTAACAAGGGTTCCTACAAGCCATCTTTCAAGTATATGTCTACAGTAGCTGCAACTGCTTGCAAGGAAAATAAGGAGACTGTGAAGCTACTTGTTACTGCTGGGCCTCATGCTCAGAAAGCAATAGGAATATGGCTTTTTGCATCCGCTGCTTGGGTCTTCAGTATGGTTATTCTTGGTGGTGTCACAAGACTTACCCGGTCCGGTCTTTCTATGACTGACTGGAAGTTCACTGGCAGCCTTCCGCCTCTAACAGACGAAGATTGGTTGGTGGAGTTTGAGAAATATAAACAATCCCCGGAGTTCAAGCGACTCGCTGGTCTATTTGCTCTCGGTGGTGGGCAAGGGATGATTGGTTGGTGGATGGTTAAAAGTGGTTTAGAAGAACCACCCTCGGAGTACTCCCAACCAAGAGTGAGCCCATATCGTCTAGCTGCTCACCTGACTTCGGCTTTTGCTATATACTGCGGACTTTTCTGGACTGCTCTTTCTGTTGTCATGCCCGAACCTCCTACCGAGTCGGTAGCTTGGGTAAATTCAGCTGCAAGAGTTAAGAGGTTTGCTATTCCTGTTGGCATCATTGTTGGTATAACTGCGGTCTCAGGAGCCTTTGTTGCAGGAAATGATGCAGGACATGCATTTAATACATTTCCGAAGATGGGAGATTCATGGATCCCAGAAGATGTTTTGAGTATGAAGCCACTTATCCGCAACTTCTTTGAGAATACAGCAACTGTGCAGCTTGATCATCGTATCCTTGCAACTGCAACCCTAGCCTCGATTGGTGGTTTATGGTGGTCAGCAAGAAAGCTCGACCTACATCCTGCTATCCGTTCTTTGATCGGAAGCACCATGGGGATGGCCGCTCTCCAGGTATTTTTTTACATAATCCTATTCTCCATCGGCATTCTGTTTACTGATTTTAGGGCGTCCACAACAATTGTGGCCACCGAGCTTATTAGATATAGTGCGGGATTCGGTGTGTTTATGGGAAATGATGTTTATCACTTAAATGCAGGTTACGTTGGCATATCGACCCTTCTATCTTATGTACCGGTTTCACTTGGCACCGCCCATCAAGCCGGGGCCTTGACCCTTTTGACTCTTATGCTTCTTCTAAATCACACCTTGCGTCGACCATCACCGATGCTTCTAAAATCGCTACCGGCAGTTGCTAAAACCATTTAA 1698 45.35 MIREDEGFANYPFDESWVTTDDIEVDISEEERAQNVNEDFAGILRTKLPETLQNPSGGGAIDKPPNHHNNKASITQVFQHSKFSWPPAIHVSGSRKKKSRKMLESRLIAIVRRGKSINQIRSSFSSSHGGGSTNVYSRFGFNHCYSTTYKHVVNPVARRCLFDGFRSVHNLNKGSYKPSFKYMSTVAATACKENKETVKLLVTAGPHAQKAIGIWLFASAAWVFSMVILGGVTRLTRSGLSMTDWKFTGSLPPLTDEDWLVEFEKYKQSPEFKRLAGLFALGGGQGMIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPTESVAWVNSAARVKRFAIPVGIIVGITAVSGAFVAGNDAGHAFNTFPKMGDSWIPEDVLSMKPLIRNFFENTATVQLDHRILATATLASIGGLWWSARKLDLHPAIRSLIGSTMGMAALQVFFYIILFSIGILFTDFRASTTIVATELIRYSAGFGVFMGNDVYHLNAGYVGISTLLSYVPVSLGTAHQAGALTLLTLMLLLNHTLRRPSPMLLKSLPAVAKTI 565
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03284 565 Pfam Cytochrome oxidase assembly protein 273 464 IPR003780 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
Ceso2g03284 565 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 512 563 IPR023754 GO:0005743(PANTHER)|GO:0006784(InterPro)|GO:0006784(PANTHER)|GO:0016020(InterPro)|GO:0016653(PANTHER)|GO:0016653(InterPro)
Ceso2g03284 565 MobiDBLite consensus disorder prediction 49 68 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03284 K02259 heme a synthase [EC:1.17.99.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:82190038 Ceso2g04111 Ceso-Chr2:99757533 dispersed
Ceso Ceso-Chr2:82190038 Ceso8g02297 Ceso-Chr8:46668795 transposed