AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03286 ATGGAGGAAATTGCAGGAAGCTATCAACACTGTATTTTGATGAATAGAAGCACACAAGTAATGAAGGAAGAGATTTGGGCGAAGCATTACTCTTCGAACCATCAGATATTGCTGGTTGGAGAAGGAGATTTTTCTTTTGCTCTTAGCTTGGCTAGCTCGTTTCGATCGGGTGTCAACATCGTAGCTTCTTCTATTGATTCTTACGATGTTGTGGTTCGGAAATACAAGAAAGCGAAAAGAAACGTGGATCGTTTGAGTCAATTGGGAGCTCAACTGTTATATGGTGTTGATGCAAGAACGATGAAGCTTCATATTGATCTCCATATGCGAAAGTTTGACCGCATCGTATACAATTTTCCCCACGCTGGGTTTTTGGGGAAAGAGAACAATCAAGGAGTCATCATGCTTCACAGAAATCTGGTTTGTAGTTTCTTCAAGAATGCAAGTCGGATGTTGCGACCAGACGGCGAAGTCCACGTATCCCACAAGACTAAATTCCCGTTCAACTGTTGGAACATCGAACAACTCGCCTCCCAAAGTTGTTTGGCGTTGCTCGAATGTGTCAAATTCAAGATCAAAGACTATCCAGGATACAAAAACAAACGAGGAGATGGATCGAGATCCGACGCCCCGTTTCCGTTAGGAAAGTGTTGTACCTTCAAATTCGTATTATCGACGTCCAAGAAATCGACCACTTCACATCATCTAAATCATCAAGAACTTTTACAAGTTCCGTTGCAGAGAGCGAATCTGCAACCGAATTTACACGCAAATCCTCCACCGGTTATCGACACTACCGCGGAATGCTTCAGGATTTTTGCCGAGTATTTTGATCACGCACGATCGACAAAAGGGCAACCGGATTGCTATCTACTGGGTCGTGTTTCGGATCATCTAAAATTCGGGTTTGAAAGATACATGGCTCCAGATCGTGGAAGACGGTTGGATGGGTACGTAAATCTTTTGGAAGAGCTTTGGAGTTTGAGTAAACGGAGGATCGTGTTCTTGGAGAACCAGTTACTAGAAACCGATCACCGTCGTGGCTTGTAG 1050 43.71 MEEIAGSYQHCILMNRSTQVMKEEIWAKHYSSNHQILLVGEGDFSFALSLASSFRSGVNIVASSIDSYDVVVRKYKKAKRNVDRLSQLGAQLLYGVDARTMKLHIDLHMRKFDRIVYNFPHAGFLGKENNQGVIMLHRNLVCSFFKNASRMLRPDGEVHVSHKTKFPFNCWNIEQLASQSCLALLECVKFKIKDYPGYKNKRGDGSRSDAPFPLGKCCTFKFVLSTSKKSTTSHHLNHQELLQVPLQRANLQPNLHANPPPVIDTTAECFRIFAEYFDHARSTKGQPDCYLLGRVSDHLKFGFERYMAPDRGRRLDGYVNLLEELWSLSKRRIVFLENQLLETDHRRGL 349
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03286 349 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 37 202 IPR019446 GO:0070042(InterPro)|GO:0070475(InterPro)
Ceso2g03286 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 168 IPR029063 -
Ceso2g03286 349 PANTHER PHENYLALANYL-TRNA SYNTHETASE 18 202 - GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER)
Ceso2g03286 349 FunFam Os09g0479300 protein 34 185 - -
Ceso2g03286 349 Gene3D Vaccinia Virus protein VP39 7 191 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03286 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:33795288 Ceso2g03286 Ceso-Chr2:82375473 dispersed
Ceso Ceso-Chr2:33902108 Ceso2g03286 Ceso-Chr2:82375473 dispersed