AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03310 ATGTTAAGGATCAAGAGAGTTCCTACTATTGTTTCCATCTACCAGAAAGAGGAGGAGGCGGAGGACGGCGGCGCCACCCGCGGTTGTGGCCGGAATTGTTTGAGAAGCTGTTGCATAACAGGTGGTTTTTCAATTTTGATATCCTTTTTGTTTTCTTCAGAAAAGTTGGTTCTATTTGCAGATTTAGGTGCTTTTGGTTGTGGAAAAATTTCCTATAATGAAAATTTAGAAAACGCTTTTGGGGCTAAGCTACCTCTGTATGCTTTTCCAAAATCCAACAAGGTTGATTCATGCGACAAAAACGAGTTCCCTTTTGCCTTCCTGGAGTCCCTTCTTCTAGGAGAGTGGGAGGATCGCATGGAAAGGGGACTTTTCCGCTATGATGTTACCACCTGTGCAACTAAGGTGATTCCAGGTGAATACGGCTTTGTTGCTCAGCTGAACGAGGGCCGCCACCTTAAGAAACGTCCCACTGAGTTCCAAGTCGATAAGGTGCTTCAGCCCTTTGATGAGAACAAGTTTAACTTCACCAAAGTCGGGCAGGAGGAAGTGCTTTTCCAGTTTGAAGCAAGTGACGACAATGAAGTCAAGTTCCACCCAAATGCTGCTATTGATCTTGGCAAATCCCCAAGTGTCGTTGCCATTAATGTTAGTCCAATTGAATATGGGCATGTGCTTCTGATCCCTCGGATTCTTGAATGCTTACCCCAAAGGATTGACCATGAAAGCTTATTGCTTGCATTGTACATGGCACGTGAGGCTGCAAGTCCACACTTTCGTCTCGGTTACAATAGCTTGGGTGCATTTGCTACTATCAATCATCTTCACTTTCAGGCTTACTACTTGGCTGTGCCATTTCCGATTGAGAAAGCTCCCACTAGAAAGATCAGTGAGTTCAACGGCGGGGTTCTGATTTCCGAGATTTTCAACTATCCTGTTAGAGGTCTTGTGTTTGAGGGTGGAAATTCTATTGAAGATTTATCCAATGCTGTTGCCGATTCCTGCATATGCCTTCAAAACAACAATATACCTTACAATGTGCTGATTTCAGATTCCGGGCGATGCATCTTTGTCATTCCGCAGTGTTATGCGGAAAAACAGGCTCTTGGAGAGGTGAGTCATGAAGTTCTCGACACTCAGGTGAATCCGGCCGTGTGGGAGATCAGCGGGCATATGGTGTTGAAACGGAAGGAGGATTACGAGTGGGCATCGGAGGAAAAAGCATGGAGGCTTCTTGCCGAGGTTTCTTTGTCTGAAGAACGGTTTCAGGAAGTGATTGCCATCATATTTGACGCCATTTTCGGTGGCGTTACTGAGAAGAAGTTGGTGGCTGATGACGAGCACGATATCGACCAAGTTGGTGGTGTGAAAAATGGGCCCAATAATGCAGATGCAGCCATGGTTACTGGGAAGCAAGAATGCCTGGTTCAATACTAG 1437 45.58 MLRIKRVPTIVSIYQKEEEAEDGGATRGCGRNCLRSCCITGGFSILISFLFSSEKLVLFADLGAFGCGKISYNENLENAFGAKLPLYAFPKSNKVDSCDKNEFPFAFLESLLLGEWEDRMERGLFRYDVTTCATKVIPGEYGFVAQLNEGRHLKKRPTEFQVDKVLQPFDENKFNFTKVGQEEVLFQFEASDDNEVKFHPNAAIDLGKSPSVVAINVSPIEYGHVLLIPRILECLPQRIDHESLLLALYMAREAASPHFRLGYNSLGAFATINHLHFQAYYLAVPFPIEKAPTRKISEFNGGVLISEIFNYPVRGLVFEGGNSIEDLSNAVADSCICLQNNNIPYNVLISDSGRCIFVIPQCYAEKQALGEVSHEVLDTQVNPAVWEISGHMVLKRKEDYEWASEEKAWRLLAEVSLSEERFQEVIAIIFDAIFGGVTEKKLVADDEHDIDQVGGVKNGPNNADAAMVTGKQECLVQY 478
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03310 478 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 3 433 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03310 K14190 GDP-L-galactose phosphorylase [EC:2.7.7.69]
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr1:102548618 Ceso2g03310 Ceso-Chr2:82858417 dispersed