AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03367 ATGCAACCCAACAAAACCCTACCGGATTCCGACCTACCGTCGCTCGCCGCCATCAAAGTCAAATCCTCCTCCCCTCGCTTCCGCTCCACCAACTCCGCCACCACCGACACCCCCACCGCCGGCGCCCAGCGCCGCATCGGCATCGCCGTCGACCTCTCCGACGAGAGCGCCTTCGCCGTCAAGTGGGCCGTCCACCAGTACCTCCGCCCCGGAGACGCCGTCATCCTCATCCACGTCCGCCCTACCTCCGTCCTCTACGGCGCCGATTGGGGATCCGTCGACCTCTCGATCGTCGACACTGACAACGAAGAATCTCAGCAGAAGCTCGAAGACGACTTCGATACTTTCACGACGACGAAGTCTGCGGACCTAGCGCAGCCTCTGGTGGACGCGCACATACCGTATAAGATCCATATTGTGAAGGATCATGATATGAAGGAGAGGCTTTGCTTGGAGGTGGAGAGGTTAGGGTTGAGCGCTGTGATTATGGGGAGCCGAGGGTTTGGGGCGACGAAGAGAGGGAGTGATGGGAGGCTTGGGAGTGTTAGTGATTACTGTGTGAGACACTGTGTGTGTCCGGTGGTGGTTGTGAGGTATCCCGATGAGAAGGATGCTGCGGTTTCGGTGGTTGAGCCGGTTGTTTCGGTGGCGAAAGCGGATGATGATGAAGAGGAGGATGATGAGGCTGAGTTTCATGATGCAAACAGTAGACACCGAGCTATCATTGGTAGCTATGGAGATATGGTGTTGTATATTATGGCTTATTGTCTTCTCCATCAAAACAACTCCGACTCGTCACCGCCGGTCACCATCTCCGGCGAAGATGATGATAAAACCCCCAAATTCCTTCAAAACCTACAACAAAATCCAACCAAAAATGGCATCAAAAAAAAAAATCTCTACCCACAAATCGATCGATCAAACCCGAATTCAAACCCTTCCTTTTCAGGATCATCAAATTCGATGTACCCATCTCTCCAAACCAAAGATCTCGCCGAGAACCTCTTTCAAGACACCGTCGAACAACACCCACCGGCGGTGCCTTTCGAATCATCGGAGGACATCATCGTCAAGATCCCATGCTCCATCGTCCACCTAATCGACAAGCAACAACATATCAAGCTCGCCTCCGGTGAGCTCGAGATCATCCGTCTCCGACAATCCGGCAACGTCGTCGTCATCCTGGCTCGGATCGAAACCCTAATCCAGTGGCCGCTAGCCAAGGACGAAGTCGTCGTGAAGCTCGACGGATCCACCAACTTCTTCAACCCGTAG 1275 53.96 MQPNKTLPDSDLPSLAAIKVKSSSPRFRSTNSATTDTPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDNEESQQKLEDDFDTFTTTKSADLAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKDAAVSVVEPVVSVAKADDDEEEDDEAEFHDANSRHRAIIGSYGDMVLYIMAYCLLHQNNSDSSPPVTISGEDDDKTPKFLQNLQQNPTKNGIKKKNLYPQIDRSNPNSNPSFSGSSNSMYPSLQTKDLAENLFQDTVEQHPPAVPFESSEDIIVKIPCSIVHLIDKQQHIKLASGELEIIRLRQSGNVVVILARIETLIQWPLAKDEVVVKLDGSTNFFNP 424
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03367 424 Gene3D HUPs 32 209 IPR014729 -
Ceso2g03367 424 CDD USP-Like 45 197 - -
Ceso2g03367 424 MobiDBLite consensus disorder prediction 303 323 - -
Ceso2g03367 424 MobiDBLite consensus disorder prediction 282 296 - -
Ceso2g03367 424 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 44 201 - -
Ceso2g03367 424 PRINTS Universal stress protein signature 176 198 IPR006015 -
Ceso2g03367 424 PRINTS Universal stress protein signature 43 61 IPR006015 -
Ceso2g03367 424 PANTHER OS01G0783500 PROTEIN 8 238 IPR044162 -
Ceso2g03367 424 Pfam Universal stress protein family 44 198 IPR006016 -
Ceso2g03367 424 MobiDBLite consensus disorder prediction 264 323 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03367 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:79002245 Ceso2g03367 Ceso-Chr2:83695011 dispersed
Ceso Ceso-Chr2:83695011 Ceso4g00278 Ceso-Chr4:2843359 dispersed
Ceso Ceso-Chr2:83695011 Ceso4g00320 Ceso-Chr4:3309744 transposed