AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03381 ATGGTCATGGGTTCTTCTCTCAAACTCGCGGTACTTTCCGCCACCGTCTTGTCCACCGCCGTTATGATCAATCTCTTGACACCATTCATTATGAATAATACTTCAATCCCGGACTTCCGAACCGTATGGATGTCCCTCGTATCATGGCTAAAACCGCCGTATCTTTACGTTGTCATCAACTGTATAATCATCACCATCGTCGCTTCTTCACGGATGCACTCCTCCAAACTCGACGATTCGCCACAAGGGCAAATCTATGTAGAGCCCAGATTCGCCACCGATTCACCACCGCTATCGACTTTTGCATCGCCGCAGTTCGAGCCTGCCGCGGTCAAGGTCGTTCTTCCCGTTGAAGTTGAAGCACCACCGCAGTTTCATCATCACCAACCGGAAGTCGTACGGTTTGACGGCGGTGCGAAGGAGGTTGTCGCCGGTGATCGAGAATTTGTTGATGAAGTTATGGAAGGGGATTTAAGGGACGAAGATATGAAGGTAGCGATGGAAGCTTACGAAGAAATATTCACGAAGAAGATGGTGGATAAATCTGTAATTTCGAAGTCTTCTTGGAAGCCTTCGAAAATAAGTGAAGTTGATCTATCGTTTCCGGTGGAGAAACCACCGGCGTCTGCTAGATTCAGCCACCGGAAACCTACCAAAGCCAGCCCCGAAGGTGGAAGAACTTTGGGAGTCGCAAAGCCAAAGCGGCAAGACACGCTGGAAACCACGTGGAAGACAATAACCGAAGGCCGGTCAGTCCCACTAACCCGACACCTCCGTAAATCCGACACGTGGGAGACACACGGTCAAAGCCGTCATAACTCCTCCGATGATAATAATCATCCCGAAAGGATGACAAAATCCGACACTTTCGACGTCTCCAAGGTCGGCGGAGGAAGCAGCAGCAGGAAACCGCCGCCTCCGACGTCAAAGCTGAGCCGGTCCGGCGGTTCGGGACGGCTGAAAAAGGAGCCGTCGTTGGGTCAGGAGGAGCTGAACCGGCGAGTAGAAGCGTTCATAAAGAAATTCAACGAAGATATGAGACTTCAGAGACAGGAATCATTGAATCAGTATATGGAGATGATTAATCGTGGGGCCCATTGA 1101 50.5 MVMGSSLKLAVLSATVLSTAVMINLLTPFIMNNTSIPDFRTVWMSLVSWLKPPYLYVVINCIIITIVASSRMHSSKLDDSPQGQIYVEPRFATDSPPLSTFASPQFEPAAVKVVLPVEVEAPPQFHHHQPEVVRFDGGAKEVVAGDREFVDEVMEGDLRDEDMKVAMEAYEEIFTKKMVDKSVISKSSWKPSKISEVDLSFPVEKPPASARFSHRKPTKASPEGGRTLGVAKPKRQDTLETTWKTITEGRSVPLTRHLRKSDTWETHGQSRHNSSDDNNHPERMTKSDTFDVSKVGGGSSSRKPPPPTSKLSRSGGSGRLKKEPSLGQEELNRRVEAFIKKFNEDMRLQRQESLNQYMEMINRGAH 366
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03381 366 PANTHER COTTON FIBER (DUF761) 16 364 - -
Ceso2g03381 366 MobiDBLite consensus disorder prediction 206 331 - -
Ceso2g03381 366 MobiDBLite consensus disorder prediction 292 315 - -
Ceso2g03381 366 MobiDBLite consensus disorder prediction 253 289 - -
Ceso2g03381 366 Pfam Domain of unknown function (DUF4408) 42 71 IPR025520 -
Ceso2g03381 366 Pfam Cotton fibre expressed protein 328 363 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03381 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:84009643 Ceso2g03685 Ceso-Chr2:90594660 dispersed
Ceso Ceso-Chr2:84009643 Ceso2g03371 Ceso-Chr2:83828106 transposed