AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03405 ATGGGGAAGAAGCGAAAACACAGTGAAGTAGAGCTGCCGGCGGCCAAGAAGGAGGAAACGGCGCCGGAAAGACCTAAACGTACTCTGTTAGGTTGGAAAGATAAGCCGGAAAACCAGCAAGATGCTACAAATTCTACTGGTTTTAGAAACAAAGAGAAAGTTCTCGTTACTTGCTCTCGTCGCATTAATTACAGGTATCGGCATTTGATGTTGAATTTGGTATCGATTTTGCCTCATTGTAAGAAGGATAATAAGGTTGAGTCCAAGGCTACCAAAGGAGCAACCCTAAATGAGCTTGTTGAACTTAAGAGCTGTTCTTCATGTCTCTTTTTTGAGATTGCTTATGTGCCGGAAGCACAAAGACCTTACTTGTGGATGTCCAAGTGCCCGAATGGTCCATCTGTGAAGTTTTTAGTTAATGCAGTTCACACGATGGAAGAGTTAAAGCTCACTGGAAATCATCTTAAAGCATACTCTTCATATTATCAAAAACTCCATGGTAACATTAATTTTTTTTGGTGTCATTTGTTTTTGAACAGATATTTGGAACTCCCAAAGGAGCACAGGAAATCAAAGCCCTACCATGATCATGTCTTTGTCTTCTCGATTGTTGATGACCACATATGGTTTCGTAATTACCAGATATCATGTCCTCATACCGGAGCAGATAAAATCGATCGTGGAGGCCTGGAAAAGATGACTCTTATTGAGGTTGGTCCAAGATTTTGTTTAAATCCAATCAAGATATTTGGTGGTAGCTTCGGAGGGCCAACGCTATATGAGAATCCATTCTATGTTTCCCCAAATCAGATACGTTCATTGGAGAAGAGACAGAAGGCAGGCAAGTATGCAAAGAAGGTTAAAGCAAAGACGAGAAGGAAAATGCACGAGATGACCAACCCACTTGAGGCCGATGAGTTTGCAGACATGTGGAAGGAATGA 942 41.51 MGKKRKHSEVELPAAKKEETAPERPKRTLLGWKDKPENQQDATNSTGFRNKEKVLVTCSRRINYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKSCSSCLFFEIAYVPEAQRPYLWMSKCPNGPSVKFLVNAVHTMEELKLTGNHLKAYSSYYQKLHGNINFFWCHLFLNRYLELPKEHRKSKPYHDHVFVFSIVDDHIWFRNYQISCPHTGADKIDRGGLEKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRSLEKRQKAGKYAKKVKAKTRRKMHEMTNPLEADEFADMWKE 313
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03405 313 Pfam Brix domain 59 248 IPR007109 GO:0006364(InterPro)|GO:0019843(InterPro)
Ceso2g03405 313 FunFam Ribosome biogenesis protein, putative 53 244 - -
Ceso2g03405 313 SUPERFAMILY Class II aaRS ABD-related 53 252 - -
Ceso2g03405 313 PANTHER RIBOSOME BIOGENESIS PROTEIN BRIX 2 312 IPR026532 GO:0000027(PANTHER)|GO:0003723(PANTHER)|GO:0005730(PANTHER)
Ceso2g03405 313 MobiDBLite consensus disorder prediction 1 45 - -
Ceso2g03405 313 MobiDBLite consensus disorder prediction 1 34 - -
Ceso2g03405 313 ProSiteProfiles Brix domain profile. 52 255 IPR007109 GO:0006364(InterPro)|GO:0019843(InterPro)
Ceso2g03405 313 SMART Brix-2 55 249 IPR007109 GO:0006364(InterPro)|GO:0019843(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03405 K14820 ribosome biogenesis protein BRX1