AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03406 | ATGGGGGATCGGTTGAGATCGGCGACCATGGAGGACTTGCCGTTGCATTTGGTGCTTGAAATCTTGACATCTGGTGGGAGATTGGGTGGGGTTGATCTTGTGTGTTTGGAGCTCACTAGTTCGGTTTTTAGAGGTGGCCATGATGGGATGGTTCCGAATGAGTTGAGATCGTTGGTTGATTTTGCGGCTTTTCGGGTTTGTGGGTCGGATACGGTTTACGGGGGTTTGAGTTGTAGAGGGAAGGAGGAGCTGTTGAGTAGGTGTGGTGGGAATTGGAAGAGGGTTTTGAGGTTCTTGCAGTCGGTGAATCAGTCTTCGGATGTGGTGGAAACGTCTGCGGGCAATCAGATGCAAATTAGGAGTGGAAGGTATCACACATTACTGATCAAGGATTCAGTGGTTTACTCTTGTGGTTCTAGTTTAAGTGGTGTTCTTGGCCATGGTCCCGAAACAACACAATGTGTAGCATTCACTCCGATCCAGTTTCCAAATCATGCCCGTGTCACTGACGTGTCAGCCTCCCACAATCATGCCGCCTTTGTCACACAGTCGGGAGAGGTTTTCACATGTGGTGACAACTCGTCGTTTTGTTGTGGGCATAGTGATACAAGCCGTCCAATATTCAAGCCGAGGCTGGTCGAAGCATTGAAGGAAGTCCCTTGCAAGCAGGTTGCAACCGGGGTTAGCTTCACCGTGTTTCTAACAAGAGAAGGTCAAGTATACACATGTGGGACCAGCGCACACGGCCAACTCGGCCACGGTGACACCCTCGACCGACCGACTCCAAAACTGGTGGAAGCCCTTGTGAGCGTTGGCCCGGTCGTCCAGATTGCTGCTGGTCCGAGTTACGCCCTTGCCGTCACCAACGATGGAACTGTTTATTCGTTCGGGTCCGGAACCAACTTTTGTCTTGGCCACGGGGAGCAGCACAACGAGCTCCGCCCTCGGCCACTTCAGTCGTTCAGGAGAAAGGGCATTCACATCGTTCGTGTCTCTGCTGGCGATGAACATGTCGTTGCACTCGATTCCAATGGATACGTGTACACTTGGGGAAAAGGCTACTGTGGGGCACTTGGCCATGGGGATGAGATCGATAAGACGACCCCCGAGCTATTGAGTAGCCTCAAAACTCACCTCGCTGTTCAGGTGTGTGCAAGCAAGAGGAAAACCTTTGTGTTGGTGGACAATGGGTGTTTGTATGGATTTGGATGGATGGGTTTTGGGAGTTTGGGATTTCCAGATAGAGGGGCATCTGATAAAGTCTTGAAACCTAGCATGCTTAATAGTCTTAAGGGTCATCATATCTCTCAAGTCAGCACTGGCTTGTATCATTCGGTTGTCGTCACCAATCGAGGCCGCATTTTTGGGTTTGGAGACAACGAGCGAGCCCAACTCGCTCACGATGAGTTGAGACTTTGTGTGCATCCGACCGAAATCTTGGTTCAAGAAGCTAATGATGCCCTTCCTTTGTTATGA | 1476 | 50.68 | MGDRLRSATMEDLPLHLVLEILTSGGRLGGVDLVCLELTSSVFRGGHDGMVPNELRSLVDFAAFRVCGSDTVYGGLSCRGKEELLSRCGGNWKRVLRFLQSVNQSSDVVETSAGNQMQIRSGRYHTLLIKDSVVYSCGSSLSGVLGHGPETTQCVAFTPIQFPNHARVTDVSASHNHAAFVTQSGEVFTCGDNSSFCCGHSDTSRPIFKPRLVEALKEVPCKQVATGVSFTVFLTREGQVYTCGTSAHGQLGHGDTLDRPTPKLVEALVSVGPVVQIAAGPSYALAVTNDGTVYSFGSGTNFCLGHGEQHNELRPRPLQSFRRKGIHIVRVSAGDEHVVALDSNGYVYTWGKGYCGALGHGDEIDKTTPELLSSLKTHLAVQVCASKRKTFVLVDNGCLYGFGWMGFGSLGFPDRGASDKVLKPSMLNSLKGHHISQVSTGLYHSVVVTNRGRIFGFGDNERAQLAHDELRLCVHPTEILVQEANDALPLL | 491 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03406 | 491 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 438 | 448 | IPR000408 | - | |
| Ceso2g03406 | 491 | Gene3D | - | 272 | 488 | IPR009091 | - | |
| Ceso2g03406 | 491 | Gene3D | - | 87 | 271 | IPR009091 | - | |
| Ceso2g03406 | 491 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 185 | 237 | IPR000408 | - | |
| Ceso2g03406 | 491 | SUPERFAMILY | RCC1-BLIP-II | 113 | 414 | IPR009091 | - | |
| Ceso2g03406 | 491 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 435 | 464 | - | - | |
| Ceso2g03406 | 491 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 291 | 344 | IPR000408 | - | |
| Ceso2g03406 | 491 | SUPERFAMILY | RCC1-BLIP-II | 381 | 479 | IPR009091 | - | |
| Ceso2g03406 | 491 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 345 | 396 | IPR000408 | - | |
| Ceso2g03406 | 491 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 238 | 290 | IPR000408 | - | |
| Ceso2g03406 | 491 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 132 | 184 | IPR000408 | - | |
| Ceso2g03406 | 491 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 397 | 451 | IPR000408 | - | |
| Ceso2g03406 | 491 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 344 | 393 | IPR000408 | - | |
| Ceso2g03406 | 491 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 237 | 287 | IPR000408 | - | |
| Ceso2g03406 | 491 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 290 | 341 | IPR000408 | - | |
| Ceso2g03406 | 491 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 184 | 234 | IPR000408 | - | |
| Ceso2g03406 | 491 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 134 | 181 | IPR000408 | - | |
| Ceso2g03406 | 491 | PRINTS | Chromosome condensation regulator RCC1 signature | 292 | 308 | IPR000408 | - | |
| Ceso2g03406 | 491 | PRINTS | Chromosome condensation regulator RCC1 signature | 438 | 454 | IPR000408 | - | |
| Ceso2g03406 | 491 | PRINTS | Chromosome condensation regulator RCC1 signature | 328 | 341 | IPR000408 | - | |
| Ceso2g03406 | 491 | PRINTS | Chromosome condensation regulator RCC1 signature | 454 | 468 | IPR000408 | - | |
| Ceso2g03406 | 491 | PRINTS | Chromosome condensation regulator RCC1 signature | 347 | 363 | IPR000408 | - | |
| Ceso2g03406 | 491 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 113 | 325 | IPR051210 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03406 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:84385213 | Ceso3g03953 | Ceso-Chr3:92765748 | dispersed |