Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03414 | ATGTCCACCAAACAATGGATTCTGCACGGCGTCGCCGCCGCCGCCCTAGCCGTCGGTGCTCACGCTTACTTCTATTACCGCCGATCCGCCTTTCGGAGTCGAGTGATCGGCATAATTCCGGCCAGGTTCGCTTCTTCTCGGTTCCAGGGCAAACCACTGGTTGATATCCTTGGCAAACCTATGATTCAGAGAACCTGGGAAAGAGCAAAGTTGGCAACAACATTGGACCGTGTTGTTGTGGCAACGGATGATGAAAAGATTGCAGAGTGCTGTAGGGGATTTGGTGCTGATGTGATAATGACGGCAGAATCCTGCAGAAATGGTGCTGAGAGGTGTAGTGAAGCACTTCAAAAGCTCGATAAGAAGTACGATATTGTTGTCAATATCCAAGGAGACGAACCTCTTATCGAGCCTGAAATAATCGATGGGATTGTCAAAGCTCTTCAGACCAGCCCAGATGCAGTTTTCAGCACGGCAGTCACTGCTTTGAAACCCGAAGATGCTTTTGATCCAAATCGTGTGAAATGTGTGGTTGACAACCGTGGTTATGCAATCTACTTTTCTCGAGGGCTGATCCCTTTTAACAAATCGGGGAAGACCAATCCTGAATTCCCATATAATCTTCATCTTGGCATTCAGAGCTATGATTCGGAGTTTTTGAAAATTTATCCGGACCTTACACCAACTCCGTTGCAACTAGAAGAAGATTTGGAACAACTTAAAGTTCTTGAAAATGGATACAAGATGAAGGTAATAAAAGTGGATCATGATGCTCATGGTGTGGATACTCCTGAAGATGTTGCCAAGATTGAAAATTATATGAGGGAAAGGAACTTGTCTTAA | 843 | 45.2 | MSTKQWILHGVAAAALAVGAHAYFYYRRSAFRSRVIGIIPARFASSRFQGKPLVDILGKPMIQRTWERAKLATTLDRVVVATDDEKIAECCRGFGADVIMTAESCRNGAERCSEALQKLDKKYDIVVNIQGDEPLIEPEIIDGIVKALQTSPDAVFSTAVTALKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPFNKSGKTNPEFPYNLHLGIQSYDSEFLKIYPDLTPTPLQLEEDLEQLKVLENGYKMKVIKVDHDAHGVDTPEDVAKIENYMRERNLS | 280 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03414 | 280 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 24 | 275 | IPR029044 | - | |
| Ceso2g03414 | 280 | CDD | CMP-KDO-Synthetase | 34 | 273 | IPR004528 | GO:0008690(InterPro) | |
| Ceso2g03414 | 280 | Pfam | Cytidylyltransferase | 36 | 248 | IPR003329 | - | |
| Ceso2g03414 | 280 | Hamap | 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. | 33 | 275 | IPR004528 | GO:0008690(InterPro) | |
| Ceso2g03414 | 280 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 35 | 277 | IPR029044 | - | |
| Ceso2g03414 | 280 | NCBIfam | 3-deoxy-manno-octulosonate cytidylyltransferase | 38 | 267 | IPR004528 | GO:0008690(InterPro) | |
| Ceso2g03414 | 280 | PANTHER | 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE | 3 | 279 | - | GO:0005829(PANTHER)|GO:0008690(PANTHER) | |
| Ceso2g03414 | 280 | FunFam | 3-deoxy-manno-octulosonate cytidylyltransferase | 33 | 275 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03414 | K00979 | 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 40421 | Ceso2g03414 | Ceso8g00973 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr1:47398644 | Ceso2g03414 | Ceso-Chr2:84593429 | transposed | |
| Ceso | Ceso-Chr2:84593429 | Ceso8g00973 | Ceso-Chr8:12659249 | wgd |