Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03415 | ATGGCCGGCGTTCTCGAAACCCTCGCCGTTCCTCGTGCCTCCCTAACTCCGATCGCTCTTTCTCCGATCTCTCACCTCTCACTTCGCCGGACCTCCTTTCTGCCGGAATCCAAAGCCTTCAACTCAACCATCACTTCCTTCCGATCGTCTGGATCTGTTAAATTGAGGTCGAACTCCGGCCGTCGTCTTGGTGGACGAATCGTCTGTGAAGCTCAGGATACAGCTGTTGAAGTACTTCCCGTAACTGATGACTCATGGGAATCACTTGTCCTTAAATCTACTCTTCCCGTACTGGTTGAGTTTTGGGCTCCGTGGTGTGGGCCCTGCCGCATGATCCACCCCGTCATCGATGAACTTGCAAAAGACTACAAGGGCAAGCTCACTTGTTACAAGGTAAATACCGATGAGAGCCCTTCGATTGCTACCAAATACGGGATAAGAAGCATCCCTACGGTTATGGTGTTCAAAGATGGTGAGAAGAAGGATGCAGTTATTGGTGCAGTTCCCAAATCAACCCTGGCTACCTGCATCGATAAGTTCTGTTAG | 546 | 50.55 | MAGVLETLAVPRASLTPIALSPISHLSLRRTSFLPESKAFNSTITSFRSSGSVKLRSNSGRRLGGRIVCEAQDTAVEVLPVTDDSWESLVLKSTLPVLVEFWAPWCGPCRMIHPVIDELAKDYKGKLTCYKVNTDESPSIATKYGIRSIPTVMVFKDGEKKDAVIGAVPKSTLATCIDKFC | 181 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03415 | 181 | PRINTS | Thioredoxin family signature | 97 | 105 | - | - | |
| Ceso2g03415 | 181 | PRINTS | Thioredoxin family signature | 105 | 114 | - | - | |
| Ceso2g03415 | 181 | PRINTS | Thioredoxin family signature | 145 | 156 | - | - | |
| Ceso2g03415 | 181 | ProSiteProfiles | Thioredoxin domain profile. | 33 | 181 | IPR013766 | - | |
| Ceso2g03415 | 181 | FunFam | Thioredoxin | 72 | 181 | - | - | |
| Ceso2g03415 | 181 | Pfam | Thioredoxin | 78 | 178 | IPR013766 | - | |
| Ceso2g03415 | 181 | SUPERFAMILY | Thioredoxin-like | 75 | 179 | IPR036249 | - | |
| Ceso2g03415 | 181 | CDD | TRX-family | 84 | 173 | - | - | |
| Ceso2g03415 | 181 | Gene3D | Glutaredoxin | 77 | 181 | - | - | |
| Ceso2g03415 | 181 | PANTHER | GEO12009P1 | 55 | 180 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Ceso2g03415 | 181 | NCBIfam | thioredoxin | 82 | 179 | IPR005746 | GO:0015035(InterPro) | |
| Ceso2g03415 | 181 | ProSitePatterns | Thioredoxin family active site. | 98 | 116 | IPR017937 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03415 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:84599961 | Ceso8g01173 | Ceso-Chr8:17085070 | dispersed | |
| Ceso | Ceso-Chr2:84599961 | Ceso2g00951 | Ceso-Chr2:16637225 | transposed |