AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03425 ATGTCGGCAATGGAGGTGGATTACTCTTTTGATGCTTCGAAGCTTCTTCAAGCAGCTTCTGATTTCTCCTTTGATCCTGGTACTCGATCAGAAGTTGCTGTGAAGGAATTTCTCAGCTCTTTTCCCCTTCCTGTTATCATCAATGCGCTGCAAACCAAAGGAGATATGCCTGGTTTGGAGGATGCGTTGATTGATTGTCTAGATAAGATATTTAGAACAAAATATGGGGCCTCCCTCATCCCAGAATACATGCCTTTCATGGTGGTTGGCCTGCAAGCATATTCTCAGAGAGTCAGAAGTTTGGCTTGTAAAACGATCTCAAGCCTTTTGGAGAATCTTGGAGATACTGATTTAGCTACTTCACTGATAAAAGAGAATGGCGTGTACCCGCTTCTACTTAATTGTCTCATCGATGGTGATGAACAAGTGGCTGTTGCCGCAACAGATGCAATCCGGAATATAGCAGGCTCTCAACAGGGAATTGAAATCATATTCCCAGCTACTCCCAGTGAAGCTACTGATATTACAAAGCTAGCAGCAAGATGTTCATCACTGGGACGAGCACGAGTTTTGGCATTGATAGTGAAGCTATTTTCTACCTCCAGTGCAGTGGCATCATTGGTTTACAACTCAAATCTCCTTGGTCTCTTGGAGGCAGAAGTTCGCAATACTAAAGATACACTCATGACCTTGAGCATTCTGGAGCTCCTTTACGAGTTGGCTGAGGTCCAGCATGGAATGGAATACGTGCTGCAGACCAATATCTTGCAGTTACTTATTTCTATAATCAGCAATTCTTCTGCTGAATCGATGTTGAGGTCAAGAGCAATGATGATAAGCGGTCGGCTTTTATCAAAGGAGAATGTTCTCATGTTTATAGATGAATCCAGTGTTAAAGCTGTGATTTCAGCCATTGATCAAAGGCTTTCATTGCTAGACAATCAAGATGCAGATGAATGTGAATGTGGTCTTGAAGCAATGGGTCAAATAGGATCATCAACCCAGGGAGCTATCTTGCTACTATCAAACACATCTGCTGCTAGACATGTTGTTAGCACTGCCTTTGATCTGCATGGTCGTGGCAAACAACTGGCTGCCTTGCATTCTCTTGGGAACATCGTAGGAGAAACTCGGCCCGAGAACAACAAGCTGCTGAATGCTGATGCTGAAGAAAACCTGCGTAGATTAATCTATGAAACAGCATCCAACACTCCGAAGCTCATACCATCGGGTCTTGTTCTTGCCATTCTTAAACTCGAGTCTGAATTTCGGATCGCGGTGAGATTCTTTTATCTTGTCCTTGGTTATAGGTTGATAGCAGGATTGGCTACTAGACCATGGTTCTTGGTGGAAATCTGCTCCAGGCAAGAGATAATAAATATAGTGACAGATCCGGTTACAGAAACAACTAAAATAGGTATGGAGGCCAGATACAACTGTTGTGAGGCGATCTATAAGGCTCTTGCATCATCACCTAAATTTCTGAATGATCCAGCCCTTTCTGGGACAGCTGAAAAGCTGGTGGAAGCTATCAGAAAGGGTCCATATCTGGCAAAAGGACGACAACGTGAAGCTCAACCTGAAGTTGCGACTGCTGACAGATTTTAG 1608 43.59 MSAMEVDYSFDASKLLQAASDFSFDPGTRSEVAVKEFLSSFPLPVIINALQTKGDMPGLEDALIDCLDKIFRTKYGASLIPEYMPFMVVGLQAYSQRVRSLACKTISSLLENLGDTDLATSLIKENGVYPLLLNCLIDGDEQVAVAATDAIRNIAGSQQGIEIIFPATPSEATDITKLAARCSSLGRARVLALIVKLFSTSSAVASLVYNSNLLGLLEAEVRNTKDTLMTLSILELLYELAEVQHGMEYVLQTNILQLLISIISNSSAESMLRSRAMMISGRLLSKENVLMFIDESSVKAVISAIDQRLSLLDNQDADECECGLEAMGQIGSSTQGAILLLSNTSAARHVVSTAFDLHGRGKQLAALHSLGNIVGETRPENNKLLNADAEENLRRLIYETASNTPKLIPSGLVLAILKLESEFRIAVRFFYLVLGYRLIAGLATRPWFLVEICSRQEIINIVTDPVTETTKIGMEARYNCCEAIYKALASSPKFLNDPALSGTAEKLVEAIRKGPYLAKGRQREAQPEVATADRF 535
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03425 535 Gene3D - 15 406 IPR011989 -
Ceso2g03425 535 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 8 535 IPR019538 GO:0005829(PANTHER)|GO:0043248(InterPro)
Ceso2g03425 535 SUPERFAMILY ARM repeat 87 497 IPR016024 -
Ceso2g03425 535 Pfam Proteasome non-ATPase 26S subunit 82 357 IPR019538 GO:0043248(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03425 K06692 26S proteasome non-ATPase regulatory subunit 5