Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03453 | ATGGGAATAACGAAGATCAAGATCTCTAAATCTTTATCCTTCCTTGCTCTAAACATTTCTGGTACAAAATACCATAATTATCACCAACCATGGCTTCTTCTGCCTCTTCATCTCTTATTATCTTCTTTTGCTTCTTGTTTACACTCTTGTTCATCTCCCAAGCCACTGTTCCTCCCTCCGAAACCTTCCGATACATTAACGAAGGCGCTTTCAGCCATTCCGTTTGAAAGATCAACCGAATACGACCCAACCTACCGTTCTCTTGAACTGTTCACCAGCCCTTTCCGCCTCGCTTTCTACAACACCACCCCAAACGCCTACACACTCGCTCTTCGCATGGGCATCCGCGGTGACCGATCCCTCGTGCGTTTCGTTTGGGAGGCCAACCGCGGGAATCCCGTTCGCGAAAACGCCACTCTCTCGTTCGGATCCGACGGAAACCTCATCCTGGCCGAGGCCGACAGCCGGATCGCATGGCAGCCCAACAACGCCCATAAGGGCGGTGTTGGGTTCGCCATACTCCCCAACGGCAACATCGTGCTCCGCGATGCTGCCGGTGGTTTCGTCTGGCAGAGCTTCGATTACCCGACCGACACACTTAGCCTCCGTGTCGGAGGCTCCAACAAGCTCGTGAGCAGGGCCTCCGTGACGGAGAACGTCAACGGCGATTATAGCCTCGTGTTAGAGCCTAAACGGCTGGCTTTGTACTGCAAGAAGACGATGCGTTACTGGTCGTTCGCCGAAGTCAACAACGGCAATGGGGATTTGCTGAATGCAACATTAGAAATGGGGGAAGCCGAATACGTCGACAGCAATTTTAACGCGCTCCGTTATCGCCAATTTGCAGTTTCGAGCGCGTGGAGATTGTTGTATACATTGTTCAAAAGACGGGTGAACGAATGGGGGGAAGCGGATGTCGAAGACGAGTGCCAATTGCCCGATCGGTGTGGGAAGTTTGGGCTTTGCGAGGACAGCCAATGCGTAGGGTGCCCGTCTCCGAACGGGGTTTTTGCGTGGAGCAAAGATTGTGTTGCGAAGTTGCGAGGATGTGAGGCGGATAGTTTTCGTTATTACGAGCTTAAAGGGGTGGACCATTTCACGGTGAAATACGGTACCGGGTTGGGCCCGGTGAGTCGGGCAGGGTGCGAGAGTAAATGCACCAAGGATTGCAAGTGCTTGGGGTATTTCTATCGTACGGATAGATCGAGGTGTTGGATTGCTCACGAGCTGAAAACGTTGACAAGGGTCGGGAACTCGACTCATATGGCGTACATTAAGACGCCACTTGGCTAA | 1293 | 52.36 | MGITKIKISKSLSFLALNISGTKYHNYHQPWLLLPLHLLLSSFASCLHSCSSPKPLFLPPKPSDTLTKALSAIPFERSTEYDPTYRSLELFTSPFRLAFYNTTPNAYTLALRMGIRGDRSLVRFVWEANRGNPVRENATLSFGSDGNLILAEADSRIAWQPNNAHKGGVGFAILPNGNIVLRDAAGGFVWQSFDYPTDTLSLRVGGSNKLVSRASVTENVNGDYSLVLEPKRLALYCKKTMRYWSFAEVNNGNGDLLNATLEMGEAEYVDSNFNALRYRQFAVSSAWRLLYTLFKRRVNEWGEADVEDECQLPDRCGKFGLCEDSQCVGCPSPNGVFAWSKDCVAKLRGCEADSFRYYELKGVDHFTVKYGTGLGPVSRAGCESKCTKDCKCLGYFYRTDRSRCWIAHELKTLTRVGNSTHMAYIKTPLG | 430 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03453 | 430 | SMART | blect-4 | 79 | 196 | IPR001480 | - | |
| Ceso2g03453 | 430 | CDD | B-lectin | 79 | 196 | IPR001480 | - | |
| Ceso2g03453 | 430 | CDD | PAN-AP-plant | 353 | 428 | - | - | |
| Ceso2g03453 | 430 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 120 | 246 | IPR036426 | - | |
| Ceso2g03453 | 430 | Gene3D | - | 91 | 193 | IPR036426 | - | |
| Ceso2g03453 | 430 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 93 | 427 | IPR051343 | - | |
| Ceso2g03453 | 430 | ProSiteProfiles | Bulb-type lectin domain profile. | 75 | 194 | IPR001480 | - | |
| Ceso2g03453 | 430 | Pfam | D-mannose binding lectin | 124 | 200 | IPR001480 | - | |
| Ceso2g03453 | 430 | PIRSF | SLG | 34 | 430 | IPR035446 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03453 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:85362730 | Ceso2g03455 | Ceso-Chr2:85375600 | dispersed | |
| Ceso | Ceso-Chr2:85362730 | Ceso2g03454 | Ceso-Chr2:85367787 | tandem | |
| Ceso | Ceso-Chr1:50231616 | Ceso2g03453 | Ceso-Chr2:85362730 | wgd | |
| Ceso | Ceso-Chr2:85362730 | Ceso4g03517 | Ceso-Chr4:78217599 | wgd |