AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03457 ATGGCGGCTGCTTCTTCTTCTTCTTCATCCCTTTCCCTTGTTATCTTCTTTTGCTTCTTCTTGTTCATCTCCGAAGCCACCGTTCCTCCCTCCAACACCTTCCATTTCGAAAACTCCGGCGATTTCGGAGATACTAACGAAATATTTACCGAATACGCCCCATTAGACTACCGCATTCTTCGGCTGCCATTCGCTGTCCCTTTCACCCTCTGTTTCTACAACACCACCCCCAATGCCTACACTCTTGCCCTTCGCATGGGCAGACAGGCTGACCGATCCGTCAAACGCTGGGTCTGGGAAGCCAACCGTGGACGCCCCGTTGGAGAAAACGCCGCGTTGTCCTTCGGATCCGACGGAAACCTCGTCCTGACCGATGCCGACGGCCGGATCGCATGGCAGACCAACACCGACAACAAGGGCGTCGTTGGGTTCGCCATCCTCCCCAACGGGAACATCGTGCTTCGCGATGCTGCCGGTCGTTTCGTCTGGCAGAGCTTCGATTACCCGACCGACACCCTCTTGTACGGTCAGAGCCTCCGTGTCGGAGGCCTCAATAAGCTCGTCAGCAGGGCCTCCGTCACGGAGAACGTGGACGGCGATTACAGCTTCGTCTTGGAGCCCGAACGGTTGGCTTTGTATTACAAGAAGACGATGCTTTACTGGTCGTCCACGTTCCCCGAGGTGAACAAGGCCAGTGGGGGTTTGGTCAACGCGACGTTGGAGATCGCAGAGGCTGAATACAGCGACGGAAATTACAACTCGCTCCGGTGTCGTTTGGCCAACGCCTCTAACGAACCGACTGTGTTACTCGGAACGAACAGATACAACAGCACGCTTTCGTATCTCCGGTTGGGGATCGATGGGAACCTAAGGCTGTATGGGTATCGTAGAGAGGCAAATGCGGTGGCGTGGAGCCTGTTGTACACCTGGTTCAATAGAGAGTGGAGCAACTCGTTGGTGGGAATCGAGGACGAGTGCCAATTGCCAGAACGGTGTGGGAAGTTTGGGCTTTGCGAGGACAGCCAGTGCGTTGGGTGCCCGACGCCCAAGGGTGTTTATGCGTGGAGCAAAGATTGCGTTGCCAAGTCGCCGGGATGTCAGGCGAGTGGTTTTCGTTATTACGAGGTCAAAGGGGTGGACCATTTCACGGTGAAATACAGTTCCGGGACGGGCCCGGTGGATCAGAAGGCTTGCGAGAGTAAATGCACCAAGGATTGCAAGTGTTTGGGGTATTTCTATCATACGGCCGGATCGATCGAGGTGTTGGATCGCTTACGAGCTGAAAACGTTGACGAGGGTTGGGAACTCAACGCATATCGCATACATTAA 1329 54.85 MAAASSSSSSLSLVIFFCFFLFISEATVPPSNTFHFENSGDFGDTNEIFTEYAPLDYRILRLPFAVPFTLCFYNTTPNAYTLALRMGRQADRSVKRWVWEANRGRPVGENAALSFGSDGNLVLTDADGRIAWQTNTDNKGVVGFAILPNGNIVLRDAAGRFVWQSFDYPTDTLLYGQSLRVGGLNKLVSRASVTENVDGDYSFVLEPERLALYYKKTMLYWSSTFPEVNKASGGLVNATLEIAEAEYSDGNYNSLRCRLANASNEPTVLLGTNRYNSTLSYLRLGIDGNLRLYGYRREANAVAWSLLYTWFNREWSNSLVGIEDECQLPERCGKFGLCEDSQCVGCPTPKGVYAWSKDCVAKSPGCQASGFRYYEVKGVDHFTVKYSSGTGPVDQKACESKCTKDCKCLGYFYHTAGSIEVLDRLRAENVDEGWELNAYRIH 442
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03457 442 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 222 IPR036426 -
Ceso2g03457 442 Gene3D - 68 167 IPR036426 -
Ceso2g03457 442 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 68 414 IPR051343 -
Ceso2g03457 442 CDD B-lectin 67 169 IPR001480 -
Ceso2g03457 442 PIRSF SLG 1 431 IPR035446 -
Ceso2g03457 442 SMART blect-4 51 169 IPR001480 -
Ceso2g03457 442 ProSiteProfiles Bulb-type lectin domain profile. 45 167 IPR001480 -
Ceso2g03457 442 Pfam D-mannose binding lectin 98 181 IPR001480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03457 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:85387451 Ceso2g03461 Ceso-Chr2:85400858 dispersed
Ceso Ceso-Chr2:85387451 Ceso2g03458 Ceso-Chr2:85389357 tandem