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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso2g03464 ATGGACTTCCAAAGATTCTATCAAACATGGTACGACCAACTCCACCACCACATCCACCACCTCCACAAGGCCCCCCGCCCACCCACCACCGACGACCACCACCACCAACTCACCCAACTCGTCAACAAGGTCATGTTCCACTTCTCCGAGTACTACCGGGTCAAGTCCCTTGCGGCCAAGCAGGACGTGCTCTCCGTCTTCTCGGCGCGGTGGTCCACCACCCTCGAGCGGTCCCTCCACTGGATCGCGGGGTGGCGGCCCACCACCGCCTTCCACCTTATCTATACCGAGTCTAGTATTCTTTTTGAATCGCGTATTGTGGATATCCTCCACGGGCTACGCACCGGTGACCTGGGCGACCTCTCGCCCGCACAGTTCACCGGTGTCAGCGAGCTCCAGTGCGAAACGGTCCAACAGGAGAACTCCATCACGGATCTGCTCTCCGATTACGATTCTCGTATGGATCTGATTCAATATGATGAGGCAAGTGCGTTAATCGGAGGGAAGTGTGTGGATCTCGATAAGAAGATCGAAGGGTTGGTGAAGATCGTGGAGAAAGCCGACGAGCTGCGGCTGCGGACGTTGAAGGCGGTGGTGGAGCTGCTCACGCCGCAGCAGGCGGTCGAGTTTCTGATAGCGGCGGCCCAGTTGCATTTCGGAATACATAGATGGGGTCTAAATCATGATCGTGAACGTGCTGAAAAATAA 708 56.36 MDFQRFYQTWYDQLHHHIHHLHKAPRPPTTDDHHHQLTQLVNKVMFHFSEYYRVKSLAAKQDVLSVFSARWSTTLERSLHWIAGWRPTTAFHLIYTESSILFESRIVDILHGLRTGDLGDLSPAQFTGVSELQCETVQQENSITDLLSDYDSRMDLIQYDEASALIGGKCVDLDKKIEGLVKIVEKADELRLRTLKAVVELLTPQQAVEFLIAAAQLHFGIHRWGLNHDRERAEK 235
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso2g03464 235 ProSiteProfiles DOG1 domain profile. 1 231 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Ceso2g03464 235 Pfam Seed dormancy control 18 96 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Ceso2g03464 235 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 2 233 IPR051886 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso2g03464 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
40429 Ceso2g03464 Ceso4g01548
40430 Ceso2g03464 Ceso4g01549
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr1:96899691 Ceso2g03464 Ceso-Chr2:85430924 dispersed
Ceso Ceso-Chr2:85430924 Ceso4g01547 Ceso-Chr4:27264690 dispersed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Ceso8g00145 . 115 468 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.454 6.72e-29 115.0
Ceso8g00131 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 74.32 1.46e-176 490.0
Ceso8g00035 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 66.959 4.78e-152 436.0
Ceso8g00446 ACH 1 404 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 56.823 2.08e-154 442.0
Ceso8g02415 ACH 24 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.762 3.90e-110 327.0
Ceso7g00283 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.103 6.12e-112 328.0
Ceso7g00772 . 190 294 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 40.952 1.25e-15 73.9
Ceso7g02232 . 47 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 74.419 7.91e-148 424.0
Ceso7g02702 . 63 263 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 35.096 1.98e-14 67.0
Ceso7g03188 . 147 468 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.384 2.78e-37 140.0
Ceso7g03317 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 68.293 2.86e-173 483.0
Ceso6g01097 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 58.559 2.47e-121 353.0
Ceso6g01236 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 45.977 1.83e-73 227.0
Ceso6g01493 . 15 139 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 49.333 1.18e-29 110.0
Ceso6g01494 . 197 236 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G41070 92.5 2.60e-18 73.2
Ceso6g02906 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 46.505 3.03e-64 203.0
Ceso5g01803 . 16 259 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 46.154 4.86e-56 179.0
Ceso5g02738 ACH 4 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 52.622 2.58e-156 451.0
Ceso5g03022 ACH 14 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 48.043 1.09e-126 379.0
Ceso5g03512 ACH 1 369 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 64.533 7.36e-153 435.0
Ceso4g00097 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 65.254 1.46e-104 305.0
Ceso4g00216 ACH 58 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 54.108 4.93e-145 426.0
Ceso4g00393 . 1 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.15 1.88e-92 276.0
Ceso4g01548 ACH 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 24.895 1.77e-11 62.0
Ceso4g01547 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.688 1.01e-12 65.5
Ceso4g01549 ACH 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.636 2.02e-13 67.4
Ceso4g01530 . 1 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 48.012 3.74e-89 267.0
Ceso4g01830 . 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 44.0 1.05e-37 126.0
Ceso4g01951 . 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 43.75 5.48e-83 255.0
Ceso4g02332 . 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 32.542 2.05e-25 104.0
Ceso4g03306 ACH 1 364 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.642 1.51e-105 323.0
Ceso3g00429 . 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 71.895 5.95e-57 174.0
Ceso3g00090 ACH 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 62.042 0.0 601.0
Ceso3g01437 ACH 7 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.522 4.38e-111 329.0
Ceso3g02992 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 38.106 1.29e-68 219.0
Ceso3g04096 . 37 289 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 58.647 1.46e-90 273.0
Ceso3g04630 . 39 120 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 40.244 2.76e-14 66.6
Ceso2g00593 . 23 197 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 53.552 2.81e-49 164.0
Ceso2g00592 ACH 250 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 61.404 5.22e-58 185.0
Ceso2g00718 ACH 1 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.045 6.47e-39 130.0
Ceso2g01948 . 97 244 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 44.633 9.35e-28 105.0
Ceso2g02409 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 41.597 1.76e-36 128.0
Ceso2g02587 ACH 2 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 51.695 3.32e-102 303.0
Ceso2g03464 ACH 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 28.169 1.25e-15 73.2
Ceso1g00178 . 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 64.655 1.51e-47 151.0
Ceso1g00430 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.714 4.12e-112 333.0
Ceso1g00479 . 31 111 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 55.556 2.36e-26 95.5
Ceso1g01408 . 30 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 56.787 4.18e-165 474.0
Ceso1g03433 ACH 20 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.98 1.50e-45 146.0
Ceso1g03611 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 53.256 3.84e-119 352.0