AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ceso2g03482 | ATGGTGATTCCTCCTGAAGTTGTGGTTGAGGACAGAATCGAGCAACTCAAGGAAAACACAAAAAGGACTTTGATGTCAATTTCAAATCCCATTAAAAGAATGAAGCTAATTGACACGATTCAAAGATTGGGAGTTGGGCACCATTTTGAAGAAGAAATCCATGAAGTTTTAGAAAATCTTCCACAAGTTCTGCCCGATGACGATTTATATACAGTGGCTTTACATTTTCGCCTTCGTCGACACAACGGTCTCCATACCCATCCTGACATTTTCCACAACTATTTGGATACAAATGGTAAGTTCAAGATGTCGTCAAATGATGATATAGAGGCATTGTTGAGTTTATATGAAGCTTCATATCTGGGTACAAATGATGAAGATATCTTAACACACGCAAAGGAATTTACTACACGACAACTCGAGAGATTAGTTTCAGAATTAAACCCCAAACTTGGTGCAAAAGTTCTTCTAAGTTTAGGGCTTCCAAGACACTTTAGAATGACAAGGTTAGAAGCAAGAAGGTATATTGAAGAATATGGCAATGAAGATGATCACAACCCCATTGTGCTGGAACTTGCAAAGTTGGATTACAATCATGTGCAATCACTCCTTCGAAGCGAGCTTGTCGAGGTTACCAAGTGGTGGAAAGATTTGGGTCTAATGAATAAGCTAAGTTTTGTTCGAGATCGACATATTGAGTGTTTTATATGGACAGTTGGACTCTTGCCCGACAAAAAATATTCAGGTGGTAGGATTGAGCTTGCTAAAATCATTGCTATTTTGCTAGTCATTGACGATATATATGACATCTATGGCTCGTATGAAGATCTTGTACTCTTTACCAATGCAATTAGAAGATGGGATTTGAGTGAAATGAAACAACTTCCTGAGTACATGAAGATATGCTACATTGCATTATATAGTACTACCAGTGAGATTTGCGACAAAGTTTTTAAAGAACATGGATTGAGTGTCCAACCATTTGTACACCAAACGTGGATTGAAATGGTTGAAGCATACATGGTGGAAGTCGAATGGATGAAAAGTGGGACTATGCCAACCTTTGAGGACTACATAAAGAATGGGATTACTACATCTGGGACATGCATGGCATTGGTTCATCTATTTTTTCTAATATCCGAAGGGGTAACTCAAGAAAATATGAGACAACTTCTTGTTCCATATCCAAAATTCTTCTCGTTGGCTGGAACCATTCTTCGTCTTTGGGATGATTTGGGAACGTCTAAGGAGGAACAAGAAAGAGGGAATGTGGTATCAAGCATACAATTGTTGATGAAAGAGGAAAACATAACAAGTGAGGAAGAAGGAAGGAAACAAATCTTGCAACTCATCCATGAGTTATGGAAAGATCTAAATGCAGAGCTAGTTACACCTAATGCACTGCTCGTGCCGATTATCAAAGTTGCCCTTAACATGTCAAGAACTTCTCAAGTTGTTTATGAGCACAATGAAGAGAGTTATTTAACAAGTGTAGAAAGTCAAGTAGAATATATGTTCTTTAAATCTATTGATATCTAG | 1539 | 37.82 | MVIPPEVVVEDRIEQLKENTKRTLMSISNPIKRMKLIDTIQRLGVGHHFEEEIHEVLENLPQVLPDDDLYTVALHFRLRRHNGLHTHPDIFHNYLDTNGKFKMSSNDDIEALLSLYEASYLGTNDEDILTHAKEFTTRQLERLVSELNPKLGAKVLLSLGLPRHFRMTRLEARRYIEEYGNEDDHNPIVLELAKLDYNHVQSLLRSELVEVTKWWKDLGLMNKLSFVRDRHIECFIWTVGLLPDKKYSGGRIELAKIIAILLVIDDIYDIYGSYEDLVLFTNAIRRWDLSEMKQLPEYMKICYIALYSTTSEICDKVFKEHGLSVQPFVHQTWIEMVEAYMVEVEWMKSGTMPTFEDYIKNGITTSGTCMALVHLFFLISEGVTQENMRQLLVPYPKFFSLAGTILRLWDDLGTSKEEQERGNVVSSIQLLMKEENITSEEEGRKQILQLIHELWKDLNAELVTPNALLVPIIKVALNMSRTSQVVYEHNEESYLTSVESQVEYMFFKSIDI | 512 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ceso2g03482 | 512 | FunFam | Isoprene synthase, chloroplastic | 163 | 502 | - | - | |
| Ceso2g03482 | 512 | SFLD | Terpene Cyclase Like 1 C Terminal Domain | 185 | 501 | IPR034741 | - | |
| Ceso2g03482 | 512 | Gene3D | Farnesyl Diphosphate Synthase | 9 | 495 | IPR008949 | - | |
| Ceso2g03482 | 512 | CDD | Terpene-cyclase-plant-C1 | 10 | 491 | IPR044814 | GO:0010333(InterPro)|GO:0016102(InterPro) | |
| Ceso2g03482 | 512 | Gene3D | - | 29 | 185 | IPR036965 | GO:0010333(InterPro)|GO:0016829(InterPro) | |
| Ceso2g03482 | 512 | Pfam | Terpene synthase family, metal binding domain | 216 | 457 | IPR005630 | GO:0000287(InterPro)|GO:0010333(InterPro)|GO:0016829(InterPro) | |
| Ceso2g03482 | 512 | SUPERFAMILY | Terpenoid cyclases-Protein prenyltransferases | 10 | 185 | IPR008930 | - | |
| Ceso2g03482 | 512 | Pfam | Terpene synthase, N-terminal domain | 9 | 147 | IPR001906 | GO:0010333(InterPro)|GO:0016829(InterPro) | |
| Ceso2g03482 | 512 | SUPERFAMILY | Terpenoid synthases | 185 | 493 | IPR008949 | - | |
| Ceso2g03482 | 512 | PANTHER | OS04G0344100 PROTEIN-RELATED | 11 | 493 | - | - | |
| Ceso2g03482 | 512 | SFLD | Isoprenoid Synthase Type I | 185 | 501 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ceso2g03482 | K20979 | geranyl diphosphate diphosphatase [EC:3.1.7.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ceso | Ceso-Chr2:85793018 | Ceso2g03484 | Ceso-Chr2:85828209 | dispersed | |
| Ceso | Ceso-Chr2:85793018 | Ceso2g03483 | Ceso-Chr2:85808653 | tandem | |
| Ceso | Ceso-Chr8:1595117 | Ceso2g03482 | Ceso-Chr2:85793018 | transposed | |
| Ceso | Ceso-Chr2:85793018 | Ceso5g03052 | Ceso-Chr5:70338154 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| CesoJARYMX010000689g00001 | . | 49 | 342 | TPS gene family | AT4G15870 | 28.846 | 7.50e-24 | 102.0 | |
| CesoJARYMX010000099g00006 | . | 311 | 606 | TPS gene family | AT1G70080 | 33.784 | 4.19e-65 | 213.0 | |
| CesoJARYMX010000099g00004 | . | 4 | 547 | TPS gene family | AT5G23960 | 37.024 | 2.54e-119 | 361.0 | |
| Ceso8g00141 | . | 72 | 569 | TPS gene family | AT1G61680 | 44.008 | 3.45e-146 | 429.0 | |
| Ceso7g00882 | . | 18 | 561 | TPS gene family | AT4G16740 | 42.473 | 1.69e-144 | 428.0 | |
| Ceso7g00885 | . | 18 | 561 | TPS gene family | AT4G16740 | 43.964 | 1.89e-153 | 451.0 | |
| Ceso7g01100 | . | 72 | 561 | TPS gene family | AT4G16740 | 44.664 | 9.39e-141 | 415.0 | |
| Ceso7g01104 | . | 18 | 561 | TPS gene family | AT4G16740 | 43.885 | 1.78e-156 | 458.0 | |
| Ceso7g02885 | . | 27 | 537 | TPS gene family | AT4G16730 | 34.241 | 1.48e-104 | 324.0 | |
| Ceso7g02935 | . | 75 | 547 | TPS gene family | AT5G23960 | 41.474 | 7.38e-126 | 376.0 | |
| Ceso7g03282 | . | 4 | 546 | TPS gene family | AT5G23960 | 40.367 | 6.22e-149 | 438.0 | |
| Ceso6g00142 | . | 51 | 802 | TPS gene family | AT4G02780 | 52.618 | 0.0 | 794.0 | |
| Ceso6g00148 | . | 91 | 800 | TPS gene family | AT4G02780 | 51.934 | 0.0 | 749.0 | |
| Ceso6g00149 | . | 91 | 512 | TPS gene family | AT4G02780 | 66.981 | 0.0 | 630.0 | |
| Ceso6g00143 | . | 91 | 800 | TPS gene family | AT4G02780 | 48.472 | 0.0 | 679.0 | |
| Ceso6g00144 | . | 50 | 802 | TPS gene family | AT4G02780 | 50.631 | 0.0 | 791.0 | |
| Ceso6g00145 | . | 95 | 802 | TPS gene family | AT4G02780 | 44.636 | 0.0 | 621.0 | |
| Ceso6g00146 | . | 246 | 802 | TPS gene family | AT4G02780 | 50.251 | 0.0 | 570.0 | |
| Ceso6g00147 | . | 91 | 248 | TPS gene family | AT4G02780 | 56.25 | 1.31e-60 | 201.0 | |
| Ceso5g03052 | . | 81 | 592 | TPS gene family | AT3G25820 | 41.683 | 2.61e-131 | 392.0 | |
| Ceso5g03054 | . | 181 | 594 | TPS gene family | AT3G25820 | 41.205 | 2.56e-110 | 335.0 | |
| Ceso5g03055 | . | 23 | 316 | TPS gene family | AT4G16730 | 39.935 | 1.18e-76 | 243.0 | |
| Ceso5g03056 | . | 374 | 494 | TPS gene family | AT3G25810 | 38.843 | 7.16e-27 | 103.0 | |
| Ceso5g03057 | . | 547 | 591 | TPS gene family | AT2G24210 | 50.0 | 2.87e-11 | 55.5 | |
| Ceso5g03053 | . | 52 | 162 | TPS gene family | AT3G25820 | 36.522 | 2.19e-14 | 68.9 | |
| Ceso5g03478 | . | 5 | 545 | TPS gene family | AT5G23960 | 37.388 | 2.24e-122 | 370.0 | |
| Ceso5g03477 | . | 15 | 542 | TPS gene family | AT5G23960 | 37.616 | 7.37e-126 | 379.0 | |
| Ceso5g03476 | . | 1 | 528 | TPS gene family | AT5G23960 | 36.94 | 1.82e-119 | 362.0 | |
| Ceso4g02485 | . | 27 | 497 | TPS gene family | AT4G16730 | 26.412 | 2.30e-58 | 201.0 | |
| Ceso3g00266 | . | 31 | 592 | TPS gene family | AT3G25820 | 43.694 | 4.09e-157 | 461.0 | |
| Ceso3g00272 | . | 17 | 588 | TPS gene family | AT2G24210 | 41.075 | 5.32e-151 | 446.0 | |
| Ceso3g00268 | . | 20 | 336 | TPS gene family | AT4G16740 | 42.683 | 9.75e-75 | 239.0 | |
| Ceso3g00270 | . | 496 | 578 | TPS gene family | AT3G25810 | 44.578 | 5.66e-17 | 72.4 | |
| Ceso3g00274 | . | 20 | 562 | TPS gene family | AT4G16740 | 46.14 | 3.09e-157 | 460.0 | |
| Ceso3g00273 | . | 20 | 387 | TPS gene family | AT4G16740 | 44.8 | 9.69e-97 | 299.0 | |
| Ceso3g00942 | . | 4 | 547 | TPS gene family | AT5G23960 | 37.794 | 2.56e-122 | 369.0 | |
| Ceso3g02863 | . | 5 | 547 | TPS gene family | AT5G23960 | 33.274 | 7.13e-108 | 331.0 | |
| Ceso3g02865 | . | 5 | 547 | TPS gene family | AT5G23960 | 35.379 | 9.52e-115 | 349.0 | |
| Ceso3g02869 | . | 41 | 547 | TPS gene family | AT5G23960 | 30.483 | 1.77e-72 | 238.0 | |
| Ceso3g03002 | . | 3 | 451 | TPS gene family | AT5G23960 | 40.222 | 2.03e-117 | 356.0 | |
| Ceso3g03000 | . | 7 | 547 | TPS gene family | AT5G23960 | 39.963 | 3.94e-148 | 435.0 | |
| Ceso3g03360 | . | 4 | 545 | TPS gene family | AT5G23960 | 37.017 | 3.64e-122 | 370.0 | |
| Ceso2g00999 | . | 109 | 547 | TPS gene family | AT5G23960 | 39.456 | 6.32e-118 | 355.0 | |
| Ceso2g00998 | . | 63 | 176 | TPS gene family | AT3G32030 | 39.474 | 7.86e-20 | 82.4 | |
| Ceso2g01209 | . | 4 | 545 | TPS gene family | AT5G23960 | 37.681 | 2.34e-125 | 376.0 | |
| Ceso2g01228 | . | 41 | 543 | TPS gene family | AT5G23960 | 36.914 | 1.83e-117 | 355.0 | |
| Ceso2g01211 | . | 41 | 545 | TPS gene family | AT5G23960 | 37.282 | 4.85e-116 | 352.0 | |
| Ceso2g03368 | . | 4 | 544 | TPS gene family | AT5G23960 | 37.5 | 1.08e-122 | 389.0 | |
| Ceso2g03484 | . | 44 | 515 | TPS gene family | AT4G16730 | 35.865 | 4.39e-101 | 311.0 | |
| Ceso2g03482 | . | 17 | 515 | TPS gene family | AT4G16730 | 33.932 | 1.20e-107 | 329.0 | |
| Ceso2g03483 | . | 7 | 515 | TPS gene family | AT4G16730 | 34.884 | 6.42e-113 | 344.0 | |
| Ceso2g03659 | . | 83 | 594 | TPS gene family | AT3G25820 | 37.67 | 2.51e-107 | 330.0 | |
| Ceso2g04038 | . | 34 | 484 | TPS gene family | AT1G79460 | 50.437 | 1.58e-151 | 448.0 | |
| Ceso2g04036 | . | 34 | 778 | TPS gene family | AT1G79460 | 51.028 | 0.0 | 788.0 | |
| Ceso2g04037 | . | 34 | 778 | TPS gene family | AT1G79460 | 51.669 | 0.0 | 778.0 | |
| Ceso2g04040 | . | 38 | 778 | TPS gene family | AT1G79460 | 50.775 | 0.0 | 781.0 | |
| Ceso2g04039 | . | 21 | 778 | TPS gene family | AT1G79460 | 50.584 | 0.0 | 772.0 | |
| Ceso1g01220 | . | 4 | 547 | TPS gene family | AT5G23960 | 36.116 | 4.43e-111 | 340.0 | |
| Ceso1g01219 | . | 41 | 547 | TPS gene family | AT5G23960 | 37.743 | 1.73e-112 | 342.0 | |
| Ceso1g01215 | . | 182 | 517 | TPS gene family | AT1G70080 | 36.012 | 5.67e-75 | 242.0 | |
| Ceso1g01218 | . | 4 | 547 | TPS gene family | AT5G23960 | 37.024 | 5.47e-119 | 360.0 | |
| Ceso1g01216 | . | 182 | 513 | TPS gene family | AT1G70080 | 33.735 | 7.68e-68 | 222.0 | |
| Ceso1g01217 | . | 4 | 72 | TPS gene family | AT5G23960 | 33.333 | 6.44e-07 | 43.5 | |
| Ceso1g01214 | . | 448 | 539 | TPS gene family | AT5G23960 | 32.258 | 4.74e-09 | 55.5 | |
| Ceso1g01223 | . | 4 | 545 | TPS gene family | AT5G23960 | 36.066 | 3.14e-117 | 365.0 | |
| Ceso1g03116 | . | 7 | 546 | TPS gene family | AT5G23960 | 38.899 | 2.40e-129 | 387.0 | |
| Ceso1g03128 | . | 2 | 547 | TPS gene family | AT5G23960 | 38.026 | 1.68e-132 | 395.0 |