AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso4g04263 ATGTCGGTAACCACCATTACAGCGTCCACAAATGGTAGTATAGGTGGCTCTGCCAATAATGCTTCAAGGAGGCATTTGAGACTCGATAGAAGCCATGTAGTTTTTGGGACTGGAAAGAGATTTCTTTTGCACCGATGTGTACGAAATGTTCCGTTTATGAGCCCCTCGGATATCTCTAGACGGCAAGGTACGAGGGTTGAGGCAGGTTGGTTTTTTAAAGGAGGAGGTAACCAGGGTTCAGAGGCAAGTTCGGAGCGTAGTGACAGTGCGAACGAGGATATATTGATATTCTTTTACCAGTTGGATTTGGCAACTAGAGTACAGTATGCGTTAAATTTGGAGGAGTATGATATTGCAAAACAATTGAGAAACAAGCTCAATGAGGTTGAAACTGAAGTTATCAAGCAGCAAGAAACTAAAAGGGGATTATCTTCAAAAAGTGAAGCTCAAGATAAGGGTATAAGCATCTTGCGATTACGAGCAGACCTGCAGAATGCAATCGAAAACGAGAACTATTCTCTGGCAGTTGAAATACGTGATCAAATTTCGAAGGTGGAGGCAGATTCATTGGCTGCATCAATTAAAGCCCAAGCTTTCCAAAAAGCTCAATTTGAGTTTCGCTTAGGCCAGAAAGTGAGGCACAAAAAGTTCGGATATAGAGCCGTGGTTTGTGGAATGGATCCAGTTTGCTGCGAAACGAGCTCGTGGATGGAAAGTGCACATGTTGACCAGTTAACTCGCGGTCCTGATCAACCCTATTATCAGGTATTGGTTGATGTACATGAAGACCCCAATCTATTGGTAGCATATGTTCCGGAGGAAAATTTACTAGCACCCGAAGAACCAGATAAGGCAAGGTTTGATCATCCATACACTTCCTTCTTATTCTACGGTATGGATTCAGCTGGAGATTTTATTCCCGTGAAGCAGCTGCGTGAGAAGTACAATAGGCCTAGACACGAGGTGCCATATGATCCGCAAGATGAAAAGAGTGGAGATGGTGGTTCTTGA 1011 43.52 MSVTTITASTNGSIGGSANNASRRHLRLDRSHVVFGTGKRFLLHRCVRNVPFMSPSDISRRQGTRVEAGWFFKGGGNQGSEASSERSDSANEDILIFFYQLDLATRVQYALNLEEYDIAKQLRNKLNEVETEVIKQQETKRGLSSKSEAQDKGISILRLRADLQNAIENENYSLAVEIRDQISKVEADSLAASIKAQAFQKAQFEFRLGQKVRHKKFGYRAVVCGMDPVCCETSSWMESAHVDQLTRGPDQPYYQVLVDVHEDPNLLVAYVPEENLLAPEEPDKARFDHPYTSFLFYGMDSAGDFIPVKQLREKYNRPRHEVPYDPQDEKSGDGGS 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso4g04263 336 MobiDBLite consensus disorder prediction 314 336 - -
Ceso4g04263 336 Gene3D - 201 304 IPR036623 GO:0003677(InterPro)
Ceso4g04263 336 MobiDBLite consensus disorder prediction 1 20 - -
Ceso4g04263 336 NCBIfam heat shock protein HspQ 204 305 IPR011722 GO:0003677(InterPro)
Ceso4g04263 336 Coils Coil 119 139 - -
Ceso4g04263 336 MobiDBLite consensus disorder prediction 314 328 - -
Ceso4g04263 336 Pfam Hemimethylated DNA-binding protein YccV like 205 301 IPR011722 GO:0003677(InterPro)
Ceso4g04263 336 SUPERFAMILY YccV-like 204 301 IPR036623 GO:0003677(InterPro)
Ceso4g04263 336 Pfam UvrB-uvrC motif 156 187 IPR001943 GO:0005515(InterPro)
Ceso4g04263 336 PANTHER YCCV-LIKE DOMAIN-CONTAINING PROTEIN 9 330 IPR053189 -
Ceso4g04263 336 SMART YccV-like-2-a 203 307 IPR011722 GO:0003677(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso4g04263 - -