AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ceso4g04264 ATGGGAACAGAAGTACAGTCGAAAAGCTCTTTTGAAGGGTATTACTCCATGAGGGATGTTAACGAGGATTCCAATAGTAGTAGCTGGCCTCTCTTTTATGGGGAAAAAGCTTTGAACAACGGTCATTATTACAACGGTTTCATACCAAGGTCAACCATTGCAGACGCACATCCGGGGTATGACAAGGATGCATTAAAGCAAAAAATGCTTGAACATGAAGACATCTTCAAAAAGCAGGTTTCCGAACTTCATCGTCTCTACAAAAGACAAAGAGACATGATGGAAGAAGTCAAACGGAAAGAGTTCCATAAGCATAGGATTTCTAATGACGCATCATCGTCTTCAAGTCTCTTACCATCTCAAAAGCCCTACGACAAGTGGCAAGTACCGAGCTTCCCGTTGGCCAACTCCACTTGTGCTAGACCCTCCATTTTCGGAGCAGAGATAAGCAACAACTCTCCGTTAAGTTGTTCAAAAGGGAACAATAGCTCAAAAGATTGTGAAGTCGTGGAGTGTAGTAGGCCTTCAAAAGTCCGAAAAAAGTTATTCGATCTCGAACTCCCCCCGGATGAGAACAACGACCAAGAAGAACACGAGCAAATCCAATGTAAGCAGGCGTCTGAAGAATCGAGCTATAAAGCTACTTCATCTAGTCAACATTTTAGGGGGTCTAACTCTAACGGGTTGGCTGATCTTAACGAACCCATCCATGTTGAAGAAGCAATTGGTCAAGTGGCGGTTGATGGTCCTAAACCAACGGTATCGCAGTTTCTTGGCCCGAACCATCATGAGTTCTTTGAGAAGTCTCAAAATGGACGTCCTAGTGGGCCGTTCAACCCGTTAGCGTTTGAGGGAAAAGGCAATGGGAGAGATTGGTTGTCTAATACGCGTGAAACAGGGAATAATAGAAGCAATATGAACTTTCCACCAGGGACTTATTCGGAAATTTCCACACGAATTCAAGATCATTCCCGATTTAGTCAAACCCCTTTGCCTTTTGCCACCTCACGTACGTCTGGTTCATACCCGTTCGTGAACTCCTCAGATTTGGGAAATTCTTGGGGAAAGCCGAACGGTAGTTTGACTCATAAGTTGACTTCATTTCAGAAACAACCATCTTTTCTATCATCTCCTCAAAGCCATGCGGTTTTTGGAGACAAATGGCGTACGAATGGATGTTATACACCAAACGGAATCTATCGAGGGTCGTCATCTGGGTCGAAAGAACCGTTATCCCGATTGCCATCTGGTGGGTTTGATAATAATCGGAACTGCAATAATCTTGAAGAAAGATCGCAAAAGGTCTTCAAAGGTTCGAATTTTATCGATTTGACAGATACTACGAAAGGTATGGATTTGAATACGGTTGAAACCGTGTCTAATGACGATAATCGTGCGAGAAACGGCAATCAAACGGTGATGCCGTGGCTTCGGGCCATGCCAGCCGTCGGCAAATATGAGACCCCTTGTGATCAGTCCAAAAACGGGGAGAAAGGTGATTCTTTGGGTAATAACGGGAAGATTCTCGGGTTTCCGGTTTTTGGGAATTCTTGCGTTTCGAAAAATGATTCCTCGTCGCTCGTTTCCACCTCTGCGTCGCTTCGTTGCCCTGTCGAGAACGGGAAAATAAAGACGGAAATAATGGAACATAGAGGATTTGACATAAATGTCGCTTGGGATGATCCGGAAAACAAGAAGATTGATTCGGAACTGGAAGCTTCTAATCTTGTGAAAGAGACAGATACAGAAATCGAGAAAATCAAGAATCATTTCGACCTGAACTCGTGCTTGACCGAGGACGAAGATTTTCTAGTCCCGGAGTCTGTTAAAAGCTCGAGTGAGAAAATTAAGAAAACAATCGAGATCGATTTAGAAGCTCCCGCCGTTCCTGAAGTTGAGGAAGAAACTGCCATCGATGAGCTCGAGGTCGAGAAATCCGATGTTTCTGAAGACGAAGAAGTGCTTGCAAAAGTGGCAGCCGAAGCAATAATCGATATATCCGGTCAGCAAGATGAAGCGGGGCATGTGTCTGAGGTGGCGATTCGTTCCGATGACACCGAGCGACTCCTATGGTTTGCGAAACTCATCGAAAACGTGGGTCCCGTCGCGAACGAGCTGGATGAGTTCGAGGAGTTGACTTTGAAACTAGAGGAGAGTAAAGAAGAAGATTACATGCCGAAGCCTTTGGCTCCCGACTTCCGGGAGCCCGAGGAGGCGGGACCGTCAACAGCCCCGACCCGACCCCGAAGAGGTCAGGCCCGGCGAGGTAGGCCCCGGAGGGATTTCCAAAGGGACATCCTTCCGGGTTTGGTGTCTCTTTCGAGGCACGAAGTGACCGAAGATCTTCAGATCTTTGGCGGGATGATGAGAGCCACAGGGCATTCGTGGAACGTAGGATTGACGAGAAGGAACGGAACCCGAGGGAGGCGGAAGGCCGTGGCAGTGGCGGTGGAGCCGCCTCCTGCCGCCAGTCCACCGCCCCCGCCTCCGCCACCACCACCGCCGCCGCCGTTGTCGGAGCAGCTTAATAACGTGGAGATGGTGGGATTGGAGGAGAGAAGCTTAACGGGATGGGGGAAGACAACGAGACGTCCCCGGAGACAACGATGTGCTGCGGGGAGTTCGGTGGCGGTCCCGTTAACGTAA 2646 48.07 MGTEVQSKSSFEGYYSMRDVNEDSNSSSWPLFYGEKALNNGHYYNGFIPRSTIADAHPGYDKDALKQKMLEHEDIFKKQVSELHRLYKRQRDMMEEVKRKEFHKHRISNDASSSSSLLPSQKPYDKWQVPSFPLANSTCARPSIFGAEISNNSPLSCSKGNNSSKDCEVVECSRPSKVRKKLFDLELPPDENNDQEEHEQIQCKQASEESSYKATSSSQHFRGSNSNGLADLNEPIHVEEAIGQVAVDGPKPTVSQFLGPNHHEFFEKSQNGRPSGPFNPLAFEGKGNGRDWLSNTRETGNNRSNMNFPPGTYSEISTRIQDHSRFSQTPLPFATSRTSGSYPFVNSSDLGNSWGKPNGSLTHKLTSFQKQPSFLSSPQSHAVFGDKWRTNGCYTPNGIYRGSSSGSKEPLSRLPSGGFDNNRNCNNLEERSQKVFKGSNFIDLTDTTKGMDLNTVETVSNDDNRARNGNQTVMPWLRAMPAVGKYETPCDQSKNGEKGDSLGNNGKILGFPVFGNSCVSKNDSSSLVSTSASLRCPVENGKIKTEIMEHRGFDINVAWDDPENKKIDSELEASNLVKETDTEIEKIKNHFDLNSCLTEDEDFLVPESVKSSSEKIKKTIEIDLEAPAVPEVEEETAIDELEVEKSDVSEDEEVLAKVAAEAIIDISGQQDEAGHVSEVAIRSDDTERLLWFAKLIENVGPVANELDEFEELTLKLEESKEEDYMPKPLAPDFREPEEAGPSTAPTRPRRGQARRGRPRRDFQRDILPGLVSLSRHEVTEDLQIFGGMMRATGHSWNVGLTRRNGTRGRRKAVAVAVEPPPAASPPPPPPPPPPPPPLSEQLNNVEMVGLEERSLTGWGKTTRRPRRQRCAAGSSVAVPLT 881
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ceso4g04264 881 MobiDBLite consensus disorder prediction 817 881 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 819 840 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 102 122 - -
Ceso4g04264 881 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 17 870 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 399 424 - -
Ceso4g04264 881 Coils Coil 702 722 - -
Ceso4g04264 881 Pfam Plant protein of unknown function (DUF863) 503 870 IPR008581 -
Ceso4g04264 881 Pfam Plant protein of unknown function (DUF863) 315 486 IPR008581 -
Ceso4g04264 881 Pfam Plant protein of unknown function (DUF863) 139 315 IPR008581 -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 205 231 - -
Ceso4g04264 881 Coils Coil 80 100 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 720 763 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 720 734 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 186 231 - -
Ceso4g04264 881 MobiDBLite consensus disorder prediction 186 204 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ceso4g04264 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
41225 Ceso4g04264 Ceso5g02854
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ceso Ceso-Chr2:69387324 Ceso4g04264 Ceso-Chr4:95909603 dispersed
Ceso Ceso-Chr4:95909603 Ceso7g01172 Ceso-Chr7:15936385 dispersed
Ceso Ceso-Chr4:95909603 Ceso5g02854 Ceso-Chr5:66962513 wgd