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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g02589 ATGGCAATATCCACCAACCTTTTATTTCTCCACATGGTGATATCCGCCGTTCTGATATCCACTTTCCTCACGCCGCCTGCTGATGCCTCCATGGGCGGCGATGAGTTCAGTTGGATAACAAACGGCGGAGCATCAGGTGGATGCAAAGGCTCTATAGCCGAGTGTATGGGCTCAGGAGAAATGGAAATGGAATCAGAGAGCACAAGACGTATACTAGCAACTACTAACTATATTAGCTATGGTGCACTACAAGGAAACAATATACCATGTTCGCAAAGAGGTGCGTCGTATTATAATTGTCAATCTGGTGGGCAAGCTAATCCGTATCAGCGTGGCTGCAGTACTATTACTCGTTGTCAACGTTAG 366 46.45 MAISTNLLFLHMVISAVLISTFLTPPADASMGGDEFSWITNGGASGGCKGSIAECMGSGEMEMESESTRRILATTNYISYGALQGNNIPCSQRGASYYNCQSGGQANPYQRGCSTITRCQR 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g02589 121 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 9 121 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
Chla6g02589 121 Pfam Rapid ALkalinization Factor (RALF) 60 121 IPR008801 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g02589 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
41752 Chla1g04523 Chla6g02589
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr1:198152158 Chla6g02589 Chla-Chr6:80629095 dispersed
Chla Chla-Chr3:272457289 Chla6g02589 Chla-Chr6:80629095 dispersed
Chla Chla-Chr6:80629095 Chla6g05971 Chla-Chr6:240445164 dispersed