Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05289 | ATGAAGACTAAGAGCAATCAGGTAACCAAGAGCAAGCCAGAAATACAAACCCAAGCTTCACAGGAGTCCCCAAGTGACCAACATAACGATGCTACAGAGGCTCCTGTTCCTGACACTGGTTCAGCCTCCATTTCGAGCAATGACAACAGAAAAGTTTCTCGAGAGGATATTGAACTTGTCCAGAACTTGATAGAACGCTGTTTGCAGCTGTATATGAACAAAGACGAGGTTGTGAAAACCTTACTAAATCGTGCAAGGATAGATCCTGGATTTACAGCTTTAGTGTGGCAGAAATTGGAAGAAGAGAATGCAGACTTTTTTAGAGCCTACTACATAAGGCTGAAACTGAAGAAGCAGATCATCCTGTTTAATCATTTGCTTGAACATCAGTACCATCTTACCAAGCATCCAGTGCATCCAAGGCTTCCTCTTGCTCCTATACAAAATGGCATCCATCCTATGCCAGTTAACAACTTACCAATGGGGTACCCTGTTCTACCACAACCTTCAATGGCAACTACTGGCCAACCTCATATGAATGCCATTGGTATGTCCAATTGTCATGTAGTCAATGGAGTGCCTGCTTCAAGTAACTTCCATCCAATGCGGATGAACTCTGGAAATGGAAGTATGGGGATGGATAGTAGTGCAGCTGATGCCACACCAGCTATTCCAGGGAATGGGGCAATATCACCCATGTCAGATATGCCTATGAGCCCTACATCAGCATCCAGTGGTCATTTCCCGTTTACTACATCTGAAATATCGGGAATGGGAGTAGACACATCAGCTCTTGATACAGCTTTTACATCTGACGTGGCAAGTTCTGTAGACTTGCATCTGCAACCTGATAATGGAACTTCTAGAGCTTTTGGTCATATCCCTTGGAATTTCAGCCTTTCAGATCTTACAGCAGATTTGTCAAATTTGGGAGATCTCGGAGCTCTTGGAAACTATCCTGGCTCCCCCTTTCTGCCATCTGATTCAGATTTATTACTTGATTCCCCGGAACAAGAGGACATTGTGGAAGATTTCTTTGCTGACTCTGTACCTGGACCACCGTGCTCCAATTCAGATGAGGAGAAGTCTTAG | 1092 | 44.14 | MKTKSNQVTKSKPEIQTQASQESPSDQHNDATEAPVPDTGSASISSNDNRKVSREDIELVQNLIERCLQLYMNKDEVVKTLLNRARIDPGFTALVWQKLEEENADFFRAYYIRLKLKKQIILFNHLLEHQYHLTKHPVHPRLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMATTGQPHMNAIGMSNCHVVNGVPASSNFHPMRMNSGNGSMGMDSSAADATPAIPGNGAISPMSDMPMSPTSASSGHFPFTTSEISGMGVDTSALDTAFTSDVASSVDLHLQPDNGTSRAFGHIPWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSDLLLDSPEQEDIVEDFFADSVPGPPCSNSDEEKS | 363 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05289 | 363 | NCBIfam | TIGR01589 domain | 57 | 113 | IPR006476 | - | |
| Chla6g05289 | 363 | Pfam | Plant protein 1589 of unknown function (A-thal-3526) | 60 | 111 | IPR006476 | - | |
| Chla6g05289 | 363 | MobiDBLite | consensus disorder prediction | 1 | 51 | - | - | |
| Chla6g05289 | 363 | PANTHER | OS02G0137100 PROTEIN | 54 | 327 | IPR006476 | - | |
| Chla6g05289 | 363 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05289 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 42759 | Chla5g01064 | Chla6g05289 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr5:35070830 | Chla6g05289 | Chla-Chr6:208323216 | dispersed | |
| Chla | Chla-Chr6:208323216 | Chla7g02851 | Chla-Chr7:124572317 | dispersed | |
| Chla | Chla-Chr6:208323216 | Chla2g06107 | Chla-Chr2:233868397 | transposed |