AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05322 ATGGTCAAAATACTCTTCATGATAGCCGCCACATTGGCCCTAGCGATCACTCTCGCTGTTGCGAGCACAGGTGACAAGAATCACGAAACAACATTCACTGGACCACCAGTCGTGGCCGCGTTTCCTAATAGGGCGAGTCATTTCCTAGTTGAAAACAAAAATCCACGAGCCGCAGACCATTGCAAGAAGGATAATGAGATTTGTTACATCTTGGAAGGTAAAAACTCAACTTGTTGTAACAACAAGTGTATGGATTTGAGCGAGGATCGGATAAACACAATTGTGGAGCATGCAAAAACAAGTGCAACGTGCAAGAACAAGTGTAAGTTTACGAGCTCGTGTTGCAGAGGAGAGTGTGTGAATTTGGCTTATGATAAGAGGCATTGTGGTACGTGTGGTAACAAGTGTATGCCCGGTGGTTACTGCATTTACGGGCTTTGCAATTACGCATAA 453 44.59 MVKILFMIAATLALAITLAVASTGDKNHETTFTGPPVVAAFPNRASHFLVENKNPRAADHCKKDNEICYILEGKNSTCCNNKCMDLSEDRINTIVEHAKTSATCKNKCKFTSSCCRGECVNLAYDKRHCGTCGNKCMPGGYCIYGLCNYA 150
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05322 150 Pfam Stigma-specific protein, Stig1 36 150 IPR006969 -
Chla6g05322 150 PANTHER STIGMA-SPECIFIC STIG1-LIKE PROTEIN 3 10 150 IPR006969 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05322 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
41873 Chla2g00986 Chla6g05322
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:209776755 Chla6g05323 Chla-Chr6:209824500 tandem