AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05328 ATGAAGTTGAAACGAAGAAGAGCAGTTCAAGTGCCTCCCAGAATTAATTCATTCATCGTTGGTGTAGTTACTGCACCGCTCGAAAAAATCCAGGACCCCTTGAAAAGTTTCGTTTGGGAATTTGAGAAGGGGGACTTCCATCATTGGATTGGTCTATTTGACTATTTTGATATGTACTTCGAGAAATACATAACACCAAGGAAGGATTTGCAGCTTGAGGATGATTTCTTGGAGCATGATCCTCCGTTCCCGAGAGAAGCTGTTCTTCAGATTCTACGTGTTGTCCGGATAATTCTAGAAAACTGCACAAATAAACACTGCTATAGTTCTTATGAGCATCATCTCTCTTCTCTGCTTGCTTCGACTGACGTGGACGTGGTTGAAGCCTGTTTACAAACTTTAACCGCATTCTTAAAGTCAGTTGGAAAACATGCTATAAAAGACGCCTCACTGCGCTCTAAACTATTTGCTTTTGCACAAGGCTGGGGAGGAACGGAAGAAGGGCTTGGATTGGTTGCATGCGCTATAGAGAATGGATTAGACCCAATTGCTCATGAATTGGGTAACACCCTACATTTTGAGTTCTATGTAGATGATGACAATCAGGGATTGCAGATTATTCATTTGCCCGGCGTTAACACTTGCCAACAGTCTGACCTTGAGCTTATGCAACAGCTGGTTAAAGAATACAAAGTGCCCGCTAACTTTAGGTTCTCTCTTTTGACAAGATTGCGTTTTGCAAGAGCCTTTGGATCACATTCTGCACGTTTACAGTACACGTGTATTCGTCTTCATGCGTTTATCTTTCTTGTTCAAGCTTGTGGTGCTAAAACTGATGATTCGGCTGCTTTTTTCAACGCTGAACCTGAGTTCATCAATGAACTGGTCACCTTGTTGAGCTATGAAGATGCAGTTCCTGAAAGAGTCCGAATACTATGTCTGCTTTCATTGGTTGCTGTTTGTCAAGATCGCAAGGCAGATGTTTTGGCTGCTGTAACATCTGGTGCTCAGCGTGGCATCCTATCCAGCCTTGCACAGAAGGCTATTGATGCTGTAGCTAGTAAATCATCTGAGTGGTCGGTTTCTTTTGCGGAGGCTTTAATTTCATTGGTCACTGTTCTAGTCTCGTCTTCAGCAGGGTGTACGGCCATGCATGAGGCAGGGTTTATACCGACCCTGTTGCCTCTTCTTAAAGATACAGATCCCCAACATTTGCATCTGGTCAGCACTGCTGTACATGTTTTGGAAGCTTTTATGGATTACAGCAATCCAGCTGCTGTTTTATTCCGTGACTTGGGAGGGTTAGACGATACAATAGTCCGGTTGAAAATAGAAGTTTCTCATATTGAAAATGGTACATTTTGTGATGCGTTAGTATCACATCATCGACGGTCACTAATGAAAGCTTTATTACGTGCTATATCCCTTGGAGCATATGGTCCTGGAACCAGCTCTCATGTATATGGTTCAGAGGGAAGTTTGTTGCCATATTGTTTATGTGTGATTTTCAAAAAAGCTCAAGATTTTAAGGGTGGTGTGTTTTCACTTGCAGCAAATCTCATGAGTGATCTTATTCAACAGGATCCTACTTGTTATCCCATTCTAGAAACAGCCGGGATTCCATCTGCATTCTTAGATTCGGTAAAAGATGGTTTAATTTGCTCCGCGGAAGCTATAACATGCATACCTCAGTGTTTAGATGCCTTGTGCCTGAATAATAGTGGTCTACAAGCTGTGAGAGATCGAAAAGCGTTGAGCTGTTTGGTAAATATATTTACAAACAAAACATATGTGCGTGTCCTTGGTGATTCTGCTAGTTCTTTGTCTAGTGGTCTGGATGAACTGATGAGACACTCCTCTTCACTACGTGGGCATGTTATGGATGTGCTGATCGAGATCTTAAAGGCCATTGAAAAACTAGGACATGGAACTGAAGTAGCTGCGGTTCCTATGGAAACCGATGCTGAGAATGAAGATTATGGGAAACTTCCTGAATCATCCGTTGATACCTCTTCATTGAATGTCGATTCGTTTCTTCCAGATTGTGTCAATAATGCTGCTTGTTTACTTGAGAAAATTCTTCAGAGTTCTGACACATGTCGTGTGTTTATCGAGAAGAAGGGACTGGAAGCTGTTCTGCAGCTATTTACCTTGCCTTTGATGCCTTCATCTGTATCTGTCGGACAAAGTTTAGCTATTGCATTCAAGGGCTTTTCTTCACAACATTCTGCATCTCTTGCTCGAGCTTTGTGTTCTTTCATGAGAGAGCACGTGAAATCAACAAATGAACTACTTATTTCACTTCAAGGTACACAGCTTGTTAATGTTGAAGATGCCAAGAGGACAAAAGTGTTGAGGTGTCTTTCTAGTCTTGAAGGGATCTTGTCTCTTTCTGGTTCTTTGACAAAGGTGAATAGCAATCTGGTGTCTGAACTTGGAGCTTCTGATGCTGATGTGTTGAAGGATCTTGGAGCTACTTTTAGGGAAATTCTCTGGCAACAATCTCTGTATTCTGAAAATGTTAATGCAACAGCTGCTGAAGCGGGTGACGTTGATGATGTTGCTATTCCTGCTCGGAATGAGTTCCTTTCAATACTTCGAGCTGGTGAAGTCTTCAGTCAACGCAGTCGCAACCGGTTGGCACGTTCAAGGGGTGGAAGGACTGGAAGGCATCTTGAAGCTTTACACATTGATTCTGACTTTCTGATGGATAACTCTGAGACAACTTCCCGAGATCTAAAAAGTAAAAGCCCGGAGGTTCTTGTTATGGAAAACCTTAACAAATTTGCTTCTACATTGCGTTCTTTTTTTACCTCTCTTTTGAAAGGGTTTACGTCAACTAACCCTAACCGTAGAAGGGGTGAAACTGGATCGCTAAGTGCTGCTTCAAAGAGTATTGGAACTGCTTTGGCGAAAGTTTTCTTTGAGGCACTTGGTTTTTCAGGGTACACTTCACATGCTGGTATTGATACGTCACTGACTTTGAAGTGTCGTTATCTTGGAAAGGTTGTGGATCACATGGGGGGATTAATATTTGACAGCAGGCGTTCGACCTTTCATACAGTAATGATAAATAACTTATATGTTCAGGGGACCTTTAAGGAATTGTCTAATACTTTTGAAGCTACCAGTCAATTGCTATGGACATTCTCTGGTGTTGATCATGATAAGGGTGAAGGAAGCAAATTGTCTCATAGTTCATGGTTACTTAAGACATTAGAAAGCTACTGTCATGTTCTGGAATATTTTGTTAACTCTAGTTATCTTTTATCTCCAGCCTCTACGTCACAGGCCCATTTGGTCTTACAGCCTGCTGAAGTTGGCCTGTCTATTAGGCTTTTCCCTGTTCCTACAGAACCTAAAGTGTTTGTTCGTATGCTTCAGTCTCAGGTTCTCGACATCATACTTCCAGTTTGGAATCACCCTGAGTTTCCCAGCTGTAATGAGGGTTTTGTTACAAGAATCGTCACACTTCTTAACTATGTATGCTGTGGTGCTAGTGATGCAAAGTTAAGTCATGGTGGTGGGTCAGGTGGTACCGCCAATCAAAGGGTCAGCGCCGCTCGTGTCCCCAATGAGACAACTATTGCCACCATTGTGGATATGGGTTTTACAAGGAGAAGAGCAGAGGAAGCATTGAGAAACATAGAAAGAAATAGTGTTGAAATGGCTATGGAATGGTTGTTTACTCATCCTGAAGATCATGTTGAGGAAGATGATGAAGAAATGGCAGAAGCACTTGCATTATCACTAGGAAGCTCATCTGAAACTCCGAAAGTAGATGATACAGAAAAATCAGAAGATGCTGAAACAGGAAATGTAGAAAAGGCACCGCATATTGATGACATTCTTTCTGGTATAACAAAGTTGGTTCAAAGTAATGATGCTATTGCTTTCCCTTTGACCGATATACTTATCACTCTTTGCAATCGAGACAAAGGAGAAGACCGGAAAAAGGTGATTTCATATCTAATTCAACAGCTGAAGCTTTGTCCACTCGAGACTATATCACATACATTGGCCTTGCTTCTTAACGAAGATGTGACAACGAGAGAAGTCGCTGCAGAAAATGGTATAGTCTCTGTAGCGATAGATATATTAGTGGACTTCAACTTGAGAACTAAATCAGGAAACGAGATGCCCGTTCCAAAATGCATTAGCGCTTTGCTTCTAATTTTGGATAGTTTGTTGCAATCCACTCCCAAAAGAATTTCTGATAGCATTGAAGAAAAAAATAAGGGATCTTTACCATTACCTCCACAAGAAGTTGCTGGTAAGATATCTGAAAAGTCTACAGGCTATCTGACTATTGAAGATGGTAAAAGAGTACTTAATCTTATTTCCGAGATGATAAGACAAAATGTTCCTGGTATGGTCATGCAAGCAGTTCTCTTGTTATGTGCCCGTTTAACAAAAACACACACTTTGGCATTGCACTTTCTTGAAATTGGAGGCATGGATGCTCTCTTTAGTATACCGGAAATTTCTTTCTTCCTTGTATATGGAACTGTGACGTCTGCTATTATACGTCATCTCATAGAAGATCCAGAGACACTACAAACAGCAATGGAGTTAGAGATCCGACAAACAGTAAGTGCCACCCATGCTGCTGGTCGTATACTTCCACCAAAGTTTTTGACATCAATGGCTCCTCTTATATCTCGAGACCCCGCGATTTTTATGAAAGCGGTCACAGCAGTTTGTCGTTTGGAATCTTCAGGTGGGAGTACCTATGTTGTATTATCTAAGGAAAAAGAGAAAGAAAATGATAAATCAAAAGTATCTGGGGTTGAAATCGGATTACCGGAAAACAAAGTCAAATGCCAGAAAAAGATTCCCACTAATCTTTCTCTGGTCATTCATCATATGCTTGATATTATAATTAAAAATCCTTCATTGGATTTAGATGAGGAATGCACTACATCTGCAAATGCTATGGAGGTTGATGAGCCTTCTACCAGTAAGGGTAAATCCAAAGTTGATGAGACAGGAAAAGAATCCGACAATCTTCCAGAAAGATCGGTACAGACAGCTAAAGTGACTTTTGTACTCAAGTTACTGAGTGATATTCTATTGATGTATGTACATGCAGCTGGAATAGTTCTGAAACGTGATCTCGAGATGTGTCACTACCGGGGATCTAATGGGATAATTCATCACATTGTACATCAGTTTCTCTATCCTTGTGGTGAATCGAGAGCAAAATTATCTGAAAAAGCGTCCTGGTTTTTGGTGGTTTTATGTGGTCGTTCAAGTGAAGGGCGTAGACGTGTTATTAACGAACTTGGTAAAGTATTATTTTCATTTTCAAGTTCAGCCAGCAATTCCTCACAGGGAAACTTATTGCCTGACAAAAAGGTTGTTGCTTTTGTTGATCTGGTATACTCCATATTGTCCAAAAATTCGTCCTCCGGTAACATTACGGGTTCTTCAGATGTAGCCAAAGGTATGATCGATGGGGGATTAATTCCATGTCTATCCGGTATTCTTCGAGTGCTGGATCTAGACCATCCTGATGCTTCCAAAGTTGTAAATATCATTCTTAAGGTGTTGGAAAGCTTGACACGGGCCGCCATTGCCTCAGAGCTATCCAATTCAGCCAAGAAGAAAAAATCCGAGAGTTCGGGGACAGCAGAGCCTAATCAAAATAGTCAACACGAGGTCACGGGCACTGAGGGTGCACATCAACAATCATCACATGAGGAAAGTGATAGCCATTCAAATTTAAACCAGCCGCCTGCAGTACAGGAAATGGGAGTTGACATGGAAGAGACTGAAACCGTGGGCTTCATGCACGGCGAGATGGAAGATAGTGATGGGTTACATAACTCAGATCAAGTTGAAATGGCTTTCCATGTTGACGACAGGGGTGACGATAATACAGGTGATGAAGATGACGACATGGGAGATGATGACGATGACAATGATGAGGACGGTGATGATGAGGATGAAGATATTGCAGAGGATGGTCATGCTTTGATGTCTCTTGCTGATACAGATGTGGAAGATCATGATGAAACCGAATTGAGAGATGAATATGACGATGACATGGTTGATGAGGAGGATGACGACTACCATGAAAATCGTGTTATTGAGGTGAGATGGAGGGAGTCTGTTGACCGTTTAGACCATATACAGGCACATGGGCAACTTGGAATTGATAGAGGACTTATTGGCATGTCTGCAGAGCCCCCTGAGAGGGTGAATGCTCATAACCTTTTTGGTGTTGGGAGACCTCTAGGCTCTGGTCGTCGACGTCAACAGAATGGAACATCCATTGAGACATCTGGTACAGAGGGAAATGGTCTCCAGCATCCTCTTCTATCAAGACCATCACAGTCTGGTGAATTGGGTTCAATACGTCCATCACGAGGCAACTCATATCGCAATTTCGAATCATTGTCTGGTGGAAATGTTGTTGTGGCACCATTCAATATGTTTGATGCTCCTGTTCTTCCCCATAATCATGTACACTCCGGCGTACCACCAACACCATTGGGTGGTAATTCTGTAGGTATGGAGTCTGTGTATACATCAGGAAGAAGAGGGCTAGGTGATAGCCGATGGACTGATGATGGCCAGCCACAAGCAGGAGGCCAGGCTGCTGCTATAGCACAGGTTGTAGAAGAACAGTTCTTGTCTCAGTTACGCACTGCTGCTCAGTCATCCGGTCCTATAATTCAGACTAATAATTCTGCATCGCTGGTAAGCCAGTCAGATGCCCCCGTAGCTGATAATACTCAACTTGCAGCAGGACTGGATAGCAGTTCACAGCAGAGTGAAGATCATCATGTAGAGATTGATCAGAATGCTATGCATTTAGAGCCGAATCAAATTGTTGAAGGTGATATTAATCCACAACAAGCTCATTCCAGTGTGGTTGTGGAACAAACAGGAGAAGATCTACAAGCACACGGTTCCAGTTCTGATCTTCAGCCCTCATCAACTTGTCATGATAACATGGAAACTGGTGAAGGAGATGGAAATGTCAATGAGCAGGAAATGTGCGGTGGCAGGCTGTCAGCATCTGTCAATGTGACAGGTGATCATCAACTGGTAACAGAGGGTGACAATGAGCCCAATTCTGGTGATTACCATGCTCCTGTTAGAGAAACTGTTGATGTTGATATGAATGTTACTGATTCAGAAGGGAATGAAAATGTCAATCCACTGCAGTCATCTGAGCAGAACACTCAGGTTGTACAGGATAACAGTCAAATTGCTCAGTCTGATGAGACAGGTGCACCGAGTGTAGCCCCTAATGAAAATGCTATAGATCCAACCTTCTTGGAGGCGCTTCCTGAAGATTTGAGGGCAGAAGTACTAGCTTCACAACAAACGCAGTCTACACCAGCACCGTCTGTTTCTTCTGCTGTTGCTGAAGATATTGATCCGGAATTTTTAGCAGCTCTTCCTCCAGATATTCAAGCAGAAGTTTTAGCCCAACAACGTGCACAGAGGGTTGTGCAGCAGGCCGAAGGACAACCTGTTGATATGGATAATGCTTCAATCATAGCTACTTTTCCGGCTGATTTGCGTCACGAGGTGCTTTTGACGTCTTCAGAATCAGTTCTCTCAGCATTGCCCTCTTCACTGCTCGCTGAAGCACAAATGCTCAGGGATAGAGCTATGAGTCACTATCACGCTCGTAGCTTGGGTGGAAGTAACCATAGAGTCTTTACCCGGAGGAGTGGCTCAGGATTTGACAGACAGACAGTAATTGCAGAAAGCTTAAAAGGAATGGAAGTGGATGGGGAACCTCTTTTAGATGCTGATGGATTGAAAGGATTGGTCAGGCTATTACGACTAGCACAGCCCCTTGCGAAAGGCCTTCTGCAGAGACTGTTTTTAAACTTATCTGCACATGGTAGCACAAGGGCAGTTATTGCATATCTGCTACTGAACATGATCAAGCCAGAGACTGAAGGACCAGTAGGGAGGTTGACAAAAATAAATTCACAGAGACTATATGGGTGTCAGTCTAATGTTGTTTATGGACGATCTCAACTCATAGATGGTCTTCCTCCACAAGTATTGCGCCAGATCCTTGAGATTTTAACTTACTTGGCTACAAATCACTCATGTGTAGCCGATATCTTGTTTTACTTCAATTCCGCAGGTGATTTGGAGTCCTTGAATACAAAAATTTATGACAAGAACAATAAAGGGAAGGAACAGTTTTTTGAAGGAGAAGAAATTCCGCAACCTGTTGGTCATGTTCCAATGCTTTTGTTCATGAAGCTCTTGAATCTCCGCAATAGTGCTCATCTGGAGCAGGTTTTGGGTCTGCTTCATGTAGTTGTATACAATGCTGCCTCAAAGTTAGACCGCGACTCTCCTACTGAACCTGCAGTGACCAATTCTGAAGATCTTCCTAGCAATGAAGCTGATGGTCATCCTCATGAAGATTCTTCCGTAGGTGAAACAGAATCGGGTTCGGTCGACAAAAACATCAATAATGGAGTATCCACATCAACTGATCAGAAGAGTGTCATGATGAATGACATCTTTTTGAAGCTACCACAAGCGGATCTACGAAATCTATGCAGCCTTCTTGGCCACGAGGGGCTTTCTGATAAAGTTTACACGCTCACTGGGGAGTTGCTGAAGAAGTTAGCATCAATTGCTCCCTCACATCGGAAGTTCTTTATTGTGGAGCTTTCAGATTTAGCTCGTAGCCTGAGCAGTAAAGCTGTCCAAGAACTCATCACACTCAGAAATACTCAGATGCTTGGTCTTAGCACTGGATCAATGGCTGGCTCTTCAGTTCTAAGAATACTGCAGACACTTAACTCCCTCACATTAGTCGATGGTAATAAATCTAAGGGTGCGGAGATTGATGGAAATCAGGAGCATGTCACCATGTGGAAATTACATGTTTCGCTTGAGCCCCTGTGGCAAGAATTAAGTGAGTGTATATGTGTCACTGAGTCACAGCTGGGACAGGGATCTTTATCTTCAGTTGCTGTTAACGAGAATGCAGGCGATCCCCCACTTCCTCTTGGAACTCAGAGGCTATTGCCTTTTATCGAGGCTTTCTTGGTTTTGTGTGATAAGCTCCAAGAAAACCATCCGCTTTTACAGCAAGATAATGCTTGTGCAACAGCAAGTAAAACCAAACTGTCAACCCCGAGTTCGTCTCAAAGTCAAACTACTGAGGGCACAGTGACATTTACTAGGTTTGCTGAGAAGCATCGCCGGCTTTTAAATGCTTTTGTCAGACAAGATCCCGGGTTGTTGGAAAAGTCTCTTTCAATGTTGCTAAAAGCGCCTAAGTTAATGGACTTTGATAACAAAAGGTCTTATTTCCGTTCTAGAATCAGGAAGCAGCACGAGCAACTCTTAGCAGGTCCACTGCGGGTAACTGTTCGCCGGGCTTATGTTTTAGAAGATTCCTATAATCAGTTGCGGATGCGATCTATACAGGACATGAAAGGGCGCTTAAATGTCCATTTTCGAGGTGAAGAGGGTATAGATGCTGGTGGTTTGACAAGAGAGTGGTATCAATTGTTGTCGAGGGTCATATTTGACAAGGGAGCATTACTTTTCACTACTGGTGGAAACAATGCGACCTTCCAACCAAACCCTAATTCGGTTTATCAGACTGAACATCTTTCTTACTTCAAATTTGTGGGCCGTGTGGTTGCTAAAGCTCTCTTTGATGGCCAACTCTTGGATGTTTACTTCACTCGGTCCTTCTATAAGCACATTCTTGGTGTTAAGGTGACATATCATGATATAGAGGCTGTTGACCCTGATTACTACAAGAACTTGAAGTGGATGTTGGAGAATGACGTAAGTGATATACCTGATCTGACATTTAGCATGGATGCGGATGAAGAAAAGCACATCCTCTACGAGAAAACAGAGGTAACTGATTATGAGCTCAAACCTGGTGGTGGGAATATAAGAGTCACAGAAGAAACAAAACACGAGTATGTGGATCTTGTTGCTGATCATAAACTGACGAGTGCGATACGTCCTCAAATCAACTCCTTCTTGGAGGGCTTTAGTGAACTGATACCGCAGGAACTCATCTCTATGTTTAATGATAAAGAACTTGAGCTGCTAATCAGTGGTCTTCCGGAAATCAATTTGAATGATTTGCAGGCCAACACTGAATATAGTGGCTACACGGCAGCTTCCAATGCCGTTACATGGTTTTGGGAGGTTGTTAAAGCCTTTAACAAGGAAGATAGAGCAAGGTTACTTCAATTTGTTACTGGTACATCAAAGGTTCCATTGGAAGGATTCAAGGCATTGCAAGGTATCTCAGGCCCACAAAGGTTTCAGATTCACAAAGCTTATGGAGCTCCAGAGAGGCTGCCCTCGGCTCATACCTGCTTCAACCAAATAGATCTTCCTGAATATAAGTCAAAGGACCAGCTTCAAGAACGCCTGCTGCTAGCGATCCATGAAGGCAGTGAAGGTTTTGGGTTTGGCTAG 10446 42.69 MKLKRRRAVQVPPRINSFIVGVVTAPLEKIQDPLKSFVWEFEKGDFHHWIGLFDYFDMYFEKYITPRKDLQLEDDFLEHDPPFPREAVLQILRVVRIILENCTNKHCYSSYEHHLSSLLASTDVDVVEACLQTLTAFLKSVGKHAIKDASLRSKLFAFAQGWGGTEEGLGLVACAIENGLDPIAHELGNTLHFEFYVDDDNQGLQIIHLPGVNTCQQSDLELMQQLVKEYKVPANFRFSLLTRLRFARAFGSHSARLQYTCIRLHAFIFLVQACGAKTDDSAAFFNAEPEFINELVTLLSYEDAVPERVRILCLLSLVAVCQDRKADVLAAVTSGAQRGILSSLAQKAIDAVASKSSEWSVSFAEALISLVTVLVSSSAGCTAMHEAGFIPTLLPLLKDTDPQHLHLVSTAVHVLEAFMDYSNPAAVLFRDLGGLDDTIVRLKIEVSHIENGTFCDALVSHHRRSLMKALLRAISLGAYGPGTSSHVYGSEGSLLPYCLCVIFKKAQDFKGGVFSLAANLMSDLIQQDPTCYPILETAGIPSAFLDSVKDGLICSAEAITCIPQCLDALCLNNSGLQAVRDRKALSCLVNIFTNKTYVRVLGDSASSLSSGLDELMRHSSSLRGHVMDVLIEILKAIEKLGHGTEVAAVPMETDAENEDYGKLPESSVDTSSLNVDSFLPDCVNNAACLLEKILQSSDTCRVFIEKKGLEAVLQLFTLPLMPSSVSVGQSLAIAFKGFSSQHSASLARALCSFMREHVKSTNELLISLQGTQLVNVEDAKRTKVLRCLSSLEGILSLSGSLTKVNSNLVSELGASDADVLKDLGATFREILWQQSLYSENVNATAAEAGDVDDVAIPARNEFLSILRAGEVFSQRSRNRLARSRGGRTGRHLEALHIDSDFLMDNSETTSRDLKSKSPEVLVMENLNKFASTLRSFFTSLLKGFTSTNPNRRRGETGSLSAASKSIGTALAKVFFEALGFSGYTSHAGIDTSLTLKCRYLGKVVDHMGGLIFDSRRSTFHTVMINNLYVQGTFKELSNTFEATSQLLWTFSGVDHDKGEGSKLSHSSWLLKTLESYCHVLEYFVNSSYLLSPASTSQAHLVLQPAEVGLSIRLFPVPTEPKVFVRMLQSQVLDIILPVWNHPEFPSCNEGFVTRIVTLLNYVCCGASDAKLSHGGGSGGTANQRVSAARVPNETTIATIVDMGFTRRRAEEALRNIERNSVEMAMEWLFTHPEDHVEEDDEEMAEALALSLGSSSETPKVDDTEKSEDAETGNVEKAPHIDDILSGITKLVQSNDAIAFPLTDILITLCNRDKGEDRKKVISYLIQQLKLCPLETISHTLALLLNEDVTTREVAAENGIVSVAIDILVDFNLRTKSGNEMPVPKCISALLLILDSLLQSTPKRISDSIEEKNKGSLPLPPQEVAGKISEKSTGYLTIEDGKRVLNLISEMIRQNVPGMVMQAVLLLCARLTKTHTLALHFLEIGGMDALFSIPEISFFLVYGTVTSAIIRHLIEDPETLQTAMELEIRQTVSATHAAGRILPPKFLTSMAPLISRDPAIFMKAVTAVCRLESSGGSTYVVLSKEKEKENDKSKVSGVEIGLPENKVKCQKKIPTNLSLVIHHMLDIIIKNPSLDLDEECTTSANAMEVDEPSTSKGKSKVDETGKESDNLPERSVQTAKVTFVLKLLSDILLMYVHAAGIVLKRDLEMCHYRGSNGIIHHIVHQFLYPCGESRAKLSEKASWFLVVLCGRSSEGRRRVINELGKVLFSFSSSASNSSQGNLLPDKKVVAFVDLVYSILSKNSSSGNITGSSDVAKGMIDGGLIPCLSGILRVLDLDHPDASKVVNIILKVLESLTRAAIASELSNSAKKKKSESSGTAEPNQNSQHEVTGTEGAHQQSSHEESDSHSNLNQPPAVQEMGVDMEETETVGFMHGEMEDSDGLHNSDQVEMAFHVDDRGDDNTGDEDDDMGDDDDDNDEDGDDEDEDIAEDGHALMSLADTDVEDHDETELRDEYDDDMVDEEDDDYHENRVIEVRWRESVDRLDHIQAHGQLGIDRGLIGMSAEPPERVNAHNLFGVGRPLGSGRRRQQNGTSIETSGTEGNGLQHPLLSRPSQSGELGSIRPSRGNSYRNFESLSGGNVVVAPFNMFDAPVLPHNHVHSGVPPTPLGGNSVGMESVYTSGRRGLGDSRWTDDGQPQAGGQAAAIAQVVEEQFLSQLRTAAQSSGPIIQTNNSASLVSQSDAPVADNTQLAAGLDSSSQQSEDHHVEIDQNAMHLEPNQIVEGDINPQQAHSSVVVEQTGEDLQAHGSSSDLQPSSTCHDNMETGEGDGNVNEQEMCGGRLSASVNVTGDHQLVTEGDNEPNSGDYHAPVRETVDVDMNVTDSEGNENVNPLQSSEQNTQVVQDNSQIAQSDETGAPSVAPNENAIDPTFLEALPEDLRAEVLASQQTQSTPAPSVSSAVAEDIDPEFLAALPPDIQAEVLAQQRAQRVVQQAEGQPVDMDNASIIATFPADLRHEVLLTSSESVLSALPSSLLAEAQMLRDRAMSHYHARSLGGSNHRVFTRRSGSGFDRQTVIAESLKGMEVDGEPLLDADGLKGLVRLLRLAQPLAKGLLQRLFLNLSAHGSTRAVIAYLLLNMIKPETEGPVGRLTKINSQRLYGCQSNVVYGRSQLIDGLPPQVLRQILEILTYLATNHSCVADILFYFNSAGDLESLNTKIYDKNNKGKEQFFEGEEIPQPVGHVPMLLFMKLLNLRNSAHLEQVLGLLHVVVYNAASKLDRDSPTEPAVTNSEDLPSNEADGHPHEDSSVGETESGSVDKNINNGVSTSTDQKSVMMNDIFLKLPQADLRNLCSLLGHEGLSDKVYTLTGELLKKLASIAPSHRKFFIVELSDLARSLSSKAVQELITLRNTQMLGLSTGSMAGSSVLRILQTLNSLTLVDGNKSKGAEIDGNQEHVTMWKLHVSLEPLWQELSECICVTESQLGQGSLSSVAVNENAGDPPLPLGTQRLLPFIEAFLVLCDKLQENHPLLQQDNACATASKTKLSTPSSSQSQTTEGTVTFTRFAEKHRRLLNAFVRQDPGLLEKSLSMLLKAPKLMDFDNKRSYFRSRIRKQHEQLLAGPLRVTVRRAYVLEDSYNQLRMRSIQDMKGRLNVHFRGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTGGNNATFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELKPGGGNIRVTEETKHEYVDLVADHKLTSAIRPQINSFLEGFSELIPQELISMFNDKELELLISGLPEINLNDLQANTEYSGYTAASNAVTWFWEVVKAFNKEDRARLLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPERLPSAHTCFNQIDLPEYKSKDQLQERLLLAIHEGSEGFGFG 3481
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2810 2826 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1997 2025 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1642 1672 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2382 2417 - -
Chla6g05328 3481 Gene3D Hect, E3 ligase catalytic domain 3241 3325 - -
Chla6g05328 3481 FunFam E3 ubiquitin-protein ligase UPL1 3362 3481 - -
Chla6g05328 3481 Pfam HECT-domain (ubiquitin-transferase) 3170 3480 IPR000569 GO:0004842(InterPro)
Chla6g05328 3481 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1190 1231 IPR015940 -
Chla6g05328 3481 Pfam Domain of Unknown Function (DUF908) 85 139 IPR010309 -
Chla6g05328 3481 Pfam Domain of Unknown Function (DUF908) 199 349 IPR010309 -
Chla6g05328 3481 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 359 3480 IPR050409 GO:0000209(PANTHER)
Chla6g05328 3481 FunFam E3 ubiquitin-protein ligase UPL1 3093 3249 - -
Chla6g05328 3481 Gene3D - 2459 2490 - -
Chla6g05328 3481 CDD HECTc 3119 3479 IPR000569 GO:0004842(InterPro)
Chla6g05328 3481 Coils Coil 1206 1226 - -
Chla6g05328 3481 Pfam Ubiquitin binding region 2458 2487 IPR025527 -
Chla6g05328 3481 Pfam Ubiquitin binding region 2494 2525 IPR025527 -
Chla6g05328 3481 Pfam Ubiquitin binding region 2422 2446 IPR025527 -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2777 2826 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1258 1275 - -
Chla6g05328 3481 Gene3D Hect, E3 ligase catalytic domain 3362 3481 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2084 2124 - -
Chla6g05328 3481 SMART hect-3 3138 3481 IPR000569 GO:0004842(InterPro)
Chla6g05328 3481 CDD UBA-atUPL1-2-like 1195 1231 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1876 1896 - -
Chla6g05328 3481 Pfam Domain of Unknown Function (DUF913) 409 723 IPR010314 -
Chla6g05328 3481 Gene3D - 1190 1262 - -
Chla6g05328 3481 SUPERFAMILY Hect, E3 ligase catalytic domain 3102 3474 IPR035983 GO:0004842(InterPro)
Chla6g05328 3481 SMART uba-6 1192 1230 IPR015940 -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1954 1985 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2075 2124 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2300 2322 - -
Chla6g05328 3481 FunFam E3 ubiquitin-protein ligase HACE1 3326 3360 - -
Chla6g05328 3481 SUPERFAMILY ARM repeat 84 1984 IPR016024 -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1236 1275 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1959 1985 - -
Chla6g05328 3481 FunFam E3 ubiquitin-protein ligase NEDD4-like 3241 3325 - -
Chla6g05328 3481 SUPERFAMILY UBA-like 1188 1239 IPR009060 GO:0005515(InterPro)
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2794 2809 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2382 2423 - -
Chla6g05328 3481 Pfam UBA-like domain 1192 1235 IPR015940 -
Chla6g05328 3481 Gene3D - 74 475 IPR011989 -
Chla6g05328 3481 Gene3D Hect, E3 ligase catalytic domains 3081 3358 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2300 2328 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 2001 2025 - -
Chla6g05328 3481 ProSiteProfiles HECT domain profile. 3140 3481 IPR000569 GO:0004842(InterPro)
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1864 1913 - -
Chla6g05328 3481 MobiDBLite consensus disorder prediction 1652 1669 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05328 K10592 E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26]
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr1:26324904 Chla6g05328 Chla-Chr6:209984923 dispersed
Chla Chla-Chr2:12959691 Chla6g05328 Chla-Chr6:209984923 dispersed
Chla Chla-Chr2:15503968 Chla6g05328 Chla-Chr6:209984923 dispersed
Chla Chla-Chr6:209984923 Chla8g04005 Chla-Chr8:128265875 dispersed
Chla Chla-Chr2:52606900 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr3:60937839 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr3:72189900 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr5:111933944 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr6:130431335 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr6:208392274 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr6:214203697 Chla6g05328 Chla-Chr6:209984923 transposed
Chla Chla-Chr2:13474923 Chla6g05328 Chla-Chr6:209984923 wgd