AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05348 ATGGAACTAATCCCATATTCCGATCCCAACACCACAACACCACCGTGGCAAGACATGTTCCGATCAGCCTCCACCCGCAAACCACCACCACCACCACCACAAAACACCACATCAACCACCGATGACCCACCACCACAACCATCACTCTCCGGTGACCCACAAGTACGTTTAGCACTATACATAGCAATGGCACATGCAGGTTTAGCTTTTGCTATCTTTATAGTATATGGTATATCTAAGCTTCTAGAAGAATATTTAAGACCAATTTTATGGGCTGTGCTTTGTAGTATTCCTTTACGTGGTATACAAGAAACCATTGTCTCTTTTTGGACTATGCCTTTGGAAAATGGTTTGTTTGATACTATTTTAGCTATTCCTGTTTATGTTTATAATGTTTTTGTTGGGACACTTGTTGAGGTTAAAGATTTTGTCTATAGGGTGATTCGGAAGAAGAGTAGAAAACCCGTTAGGAAACGAAGTGGCTTTTCGAGTTTGGTTAGATGGCTGGTGTCTTTTTGGGTTTTTGTTATGGTTTATGAACAATTTGGTGTGTTTGGTGGTGTGGCTTTGTTAGGGTTAGGGTTTATGTTTACTTCTAGTAAAGTTGAGTCTAAGATGTCGTCGTTTAAGGGTCGTGGTTTGAGAAGTAGTGGTTTTTCTGGTTTTTTGACTAAAGGGATTTTGATAAGGTTGGAGACTATTGTGGCGATGGGGTTGATTTTGGGTATGATTTTGGGGTCTTTTGTTGGGGTGATGTTTTTTTCGTATAAGATTGGGGTTGAAGGAAAAGATGTGGTTTATTCAATTAAGTCACATGTGCAAGAGAATAATTACGCTGAGAAGATTGGGTTAAGGCAATGGATGGATGATAATAATGTTCCGGGAATGGTAGATAAGTACACGACTCAGTTTTATGAAACGGTAAATGAACAGATTGATAGTTTGGCTGTGCAGTATAATGTGACGGTAATAGTTCAAGAAATGAAACAGATGATTACACCACGGTTAAATGGAGGAAACTATACTGCACCTTCTACTGCATTATCAACGCCAAATCCGTATGATGAAAAGATACTAAGTTTGAAGAAAATGGTTACTAATCGTGAATGGTCAGCAATTTATTCAGAAGTCAATGCTATGTTAAACGAGGCTCGTGTGAGTAAAGTAGATATGATTGAGAAAGCGAAAGCAATTGCTTTTCAAGGAAAAGATGTGTTACAACGTGTGCTTACAAGTAGCAAATCAATTATGGGTGGTAGTACTAAGCTCGTGTTTATAGTTATCAATTCAATACTTTCTGGAGCGGAACTTTTAACTTTGTATCTCAATCGATGGTTTTCATATGGGTTTTGTATTCTTTGA 1362 38.4 MELIPYSDPNTTTPPWQDMFRSASTRKPPPPPPQNTTSTTDDPPPQPSLSGDPQVRLALYIAMAHAGLAFAIFIVYGISKLLEEYLRPILWAVLCSIPLRGIQETIVSFWTMPLENGLFDTILAIPVYVYNVFVGTLVEVKDFVYRVIRKKSRKPVRKRSGFSSLVRWLVSFWVFVMVYEQFGVFGGVALLGLGFMFTSSKVESKMSSFKGRGLRSSGFSGFLTKGILIRLETIVAMGLILGMILGSFVGVMFFSYKIGVEGKDVVYSIKSHVQENNYAEKIGLRQWMDDNNVPGMVDKYTTQFYETVNEQIDSLAVQYNVTVIVQEMKQMITPRLNGGNYTAPSTALSTPNPYDEKILSLKKMVTNREWSAIYSEVNAMLNEARVSKVDMIEKAKAIAFQGKDVLQRVLTSSKSIMGGSTKLVFIVINSILSGAELLTLYLNRWFSYGFCIL 453
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05348 453 PANTHER TRANSMEMBRANE PROTEIN 19 435 IPR002549 -
Chla6g05348 453 MobiDBLite consensus disorder prediction 1 50 - -
Chla6g05348 453 MobiDBLite consensus disorder prediction 1 20 - -
Chla6g05348 453 MobiDBLite consensus disorder prediction 25 50 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05348 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:211002966 Chla6g05351 Chla-Chr6:211082587 dispersed
Chla Chla-Chr6:210999247 Chla6g05348 Chla-Chr6:211002966 tandem