Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chla6g05412	ATGAATGAAGATGATGTATTATTTCACATCACTTCCTACACTCCCCCATCCGAAAGATACGAATTTTCTGATGAAACAAAGCTAAAAATAGTCAACTGTGTCCCTCAGCTACCTGATACGAATACAAATACCAATAATGCAACTGCACAACCACGTATTTCATTCTCATTTCCTGTCCCTAGAATGTCTTTCCAAAAAGGGTCAGTTTCGCCTGCAAATACGAAACTAAGGAGTTGTGATGTTTACATAGGATACCATGGTCAAAATCCAAACTTGGTTCGGTTTTGGATTGCGTGTTTTGTTGCTGACAGGGCGAAATACGCTGATTCTCAAAGCCATGAGATTGCTGATAGAGTAATATGTTCGGTTACATTTGGGGTTGTGGTTGTTACTAAAGAGAGCTTGTTAAGTTACTTAATTGGAAATGTTTTAGCTGAGAATTCGGATAGTAAAGAGTGTAAAGAAGCGGTAGACGGGTTGATGAGGTCCCACGAGTTTAAACTCGAAGCAAATGAAGGTAATTGGCGATTATGTGTAGCGAAAACAGCCGGGATACTAAAGGGTAGACTTGGTAGAATGAGCGTAGCCGAACCTGAAATTGAGAGTTTCGACGAAATCCCGTTTCCGAAAAATAAATTTTTCGTGGGCAGAGAAAAGGAGCTTGCAGAGATTGAAACAGCTTTTTTCGGATGTCAGGACTGTAATGATAACCACAGTACTGTAAATGTCGTTAAAGAAGTAACACCAGAAGGGCTAGCAGATGAGGAGAGTGAAGTAGATGGAAGTAAAAATGGGAAGTTTATTAATTTAGAAGTTGGAAAGTGTAACGAACCGGAATTAGAAGCATGGGTCGAACCAGTAATTGGGAGAAATTCATTTAAGAGGCAGAAATACAAGAAAACGAAAAGTGGGAAATACAAAAGTTTCGGAAGCAGCATAGTATGCATCAATGGGAGTCCAGGAATGGGGAAAACCGAGCTAGCATTAGAGTTTGCTCACAGATACTGTCAACGATACAAGATGGTGTTATGGGTCGGTGGTGAAGCTCGGTATTTCAGACAAAACATATTGAATCTCTCGTTAAATTTGGGGTTAGATGTAAGTGCAGATGAAGAGAAAGAAAGAGGGAGGATTAGGAGTTTCGATGAGCAAGAAACCGAAGCATTTAAAAGGGTAAAACGGGAATTATTTCGTGATATGCCTTATCTACTTATCATCGATAATCTGGAAACGGAAAAAGATTGGTGGGAAGGTAGAGATTTACATGATCTGATACCACGAAACACGGGTGGTTCACATGTTATTATCACAACTAGACTCCCAAAAGTAATGAGCTTTGATCCAATGCCGCTTCAACCATTGCAATTAAAAGAAGCAATCTTATTAATGAAAGGAAGACGAAAGAAAGAGTACCCTGGTGAAGAGATTGAAATTCTTGGGAAATTTAATGAGAAATTGGAGAGGTCGACTTTCGGGTTATGGGTGATAGGGTCGTTGCTTACTGAACTTGCAATCGCTCCTTCAACACTTTTTGAAGCCATTAATCATATTCGTGCAGACGAACCTTTGTCTCATATTGATGAAGCGTTTTGGGGTAACAATAAGTTTCTACTCAAAGTCTTGATCTTTGCATTACTATTTTGCATGAAGCGAATGGGACTAAAAACCTTCTTGCCTCGAAGATGCTTCTTGTCGGGCTTGGTTTGCTCCATTACCCGTGTCAGCAAATTTACTAGCTGCAGCTGCAACAAGCATAAGCAAGTCCAACAACGGTTCAAAAATGGGTCAAGTGTGCAATCGACATTCTTTTGCTGTTCGGGTTTTCTAAAGAACCAAACTTCAAAGAGTGAAGATGATTCCGCCCTTGTGTTGGTCAAATTAGGCCTTGCTAGAAGAGCGAATAAACATCATCCCGGATGTTACATCCTCCTTCACCCCATTGCCCAAAATTTTGCAAAACTTAAAGGGGGTATAATCACAGCCAAAGCAACAATTCATGGTATAAGGATAATAGGTAACCCGATTTTAAACTCAGACCATCTCTGGGCTTCTGCTTTTTTAGTCTTTGGGTTCAAATCAGAGCCACCATTAGTGCAGCTAAAAGCCAACGACATGGTTCTCTTCATAAAGAAAACCGCACTCCCATTGTCAATCAGGGCATTCACGACATTTTCAAGATGCAATTCAGCTTTGGAGCTACTAAAAGTATGCACAAATGTTCTTGAAGAAGTGGAAAAATCGTTTGTGTCACAGATACAGGATTGGTGTCATGGGTCACTTTGTTGGAGGAAGAAGATGAACTCACACAAGAGGATTGACGAGTACGTGTGGCAAGATGTGACATTATTGAAGGCTACTTTACTAGAAACACGAGCGAAGTTGTTGTTAAGAGGTGGACATTTTGACAACGGGGAAGAGCTGTGTAGGACGTGTATTAGCATCCGGACAGTAATGCTTGGTCATAATCATGCTCAAACTCTGGCTGCTCAAGAAACGTTAGCAAAATTAGTTAGAATGAGGAGTAAGATATAG	2532	40.4	MNEDDVLFHITSYTPPSERYEFSDETKLKIVNCVPQLPDTNTNTNNATAQPRISFSFPVPRMSFQKGSVSPANTKLRSCDVYIGYHGQNPNLVRFWIACFVADRAKYADSQSHEIADRVICSVTFGVVVVTKESLLSYLIGNVLAENSDSKECKEAVDGLMRSHEFKLEANEGNWRLCVAKTAGILKGRLGRMSVAEPEIESFDEIPFPKNKFFVGREKELAEIETAFFGCQDCNDNHSTVNVVKEVTPEGLADEESEVDGSKNGKFINLEVGKCNEPELEAWVEPVIGRNSFKRQKYKKTKSGKYKSFGSSIVCINGSPGMGKTELALEFAHRYCQRYKMVLWVGGEARYFRQNILNLSLNLGLDVSADEEKERGRIRSFDEQETEAFKRVKRELFRDMPYLLIIDNLETEKDWWEGRDLHDLIPRNTGGSHVIITTRLPKVMSFDPMPLQPLQLKEAILLMKGRRKKEYPGEEIEILGKFNEKLERSTFGLWVIGSLLTELAIAPSTLFEAINHIRADEPLSHIDEAFWGNNKFLLKVLIFALLFCMKRMGLKTFLPRRCFLSGLVCSITRVSKFTSCSCNKHKQVQQRFKNGSSVQSTFFCCSGFLKNQTSKSEDDSALVLVKLGLARRANKHHPGCYILLHPIAQNFAKLKGGIITAKATIHGIRIIGNPILNSDHLWASAFLVFGFKSEPPLVQLKANDMVLFIKKTALPLSIRAFTTFSRCNSALELLKVCTNVLEEVEKSFVSQIQDWCHGSLCWRKKMNSHKRIDEYVWQDVTLLKATLLETRAKLLLRGGHFDNGEELCRTCISIRTVMLGHNHAQTLAAQETLAKLVRMRSKI	843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chla6g05412	843	SMART	AAA-5	310	475	IPR003593	GO:0016887(InterPro)
	Chla6g05412	843	Pfam	NB-ARC domain	310	446	IPR002182	GO:0043531(InterPro)
	Chla6g05412	843	Gene3D	-	274	447	IPR027417	-
	Chla6g05412	843	FunFam	p-loop containing nucleoside triphosphate hydrolase superfamily protein	290	449	-	-
	Chla6g05412	843	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	211	506	IPR027417	-
	Chla6g05412	843	PANTHER	DNA REPAIR PROTEIN RADA	72	836	-	GO:0000725(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chla6g05412	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	41820	Chla2g00326	Chla6g05412

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Chla	Chla-Chr1:289343322	Chla6g05412	Chla-Chr6:212890540	dispersed
	Chla	Chla-Chr2:9799102	Chla6g05412	Chla-Chr6:212890540	dispersed
	Chla	Chla-Chr2:183699963	Chla6g05412	Chla-Chr6:212890540	dispersed