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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05592 ATGAGGATAAAAAACAAAAACAAAACTTCGATACTGTTGCCTGAGAAAGTCTCTACCGATCAGAGTCCTCAACAGCCAAATTCTTTTGAAGGTGAAAGTCTTCTATATCTTCTCAACTCAATTCAAAGACTAAAAGATGAATCTTTACCTCATAAAATTTGCAACAATTTTCAATTAGGCGTAAATGGGGTGACCCGTGCAATACTTATAGCAACTGACTGTAATCCTCGAGGGCTAACAAAACACCTACCAGTCCTTATAAAAAGGGGATCTTTCAAATTAGGTGAAATTGTGAATATGAAGACAGCTATGGCAATTGGAGTTAAGGCTAGAGGAAATTCAATCAACAAACTCATAGGCGAGATTCTTGGAGATAAGAATGTAAATAATGGCGTTGTGGTCGTTGAGTGA 411 36.98 MRIKNKNKTSILLPEKVSTDQSPQQPNSFEGESLLYLLNSIQRLKDESLPHKICNNFQLGVNGVTRAILIATDCNPRGLTKHLPVLIKRGSFKLGEIVNMKTAMAIGVKARGNSINKLIGEILGDKNVNNGVVVVE 136
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05592 136 PANTHER OS07G0636400 PROTEIN 67 128 - -
Chla6g05592 136 MobiDBLite consensus disorder prediction 11 26 - -
Chla6g05592 136 MobiDBLite consensus disorder prediction 1 26 - -
Chla6g05592 136 Gene3D - 37 129 IPR029064 -
Chla6g05592 136 SUPERFAMILY L30e-like 51 115 IPR029064 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05592 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1106715 Chla Chla6g05592 Chla-Chr6:221235532 Chla8g04712 Chla-Chr8:157096273
1159514 Chla Chla6g05561 Chla-Chr6:219551447 Chla6g05592 Chla-Chr6:221235532