AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05684 ATGGACCCAATGAACCAAGAAATAAGTCCCGATGCCTCACTAACTGCTCCAGAAAGCGGCGTGGTGCCTACGAAAGATCCAAGTGAAAGCGAGCACAAAAGCTCCAAACCTAAGAGAGTTGATCCAATCAATGACCCTACTGAAGTCATAATCGGACAGGTCGTCACGGGTGTTGTCGAGGCAACTTTTGATGCTGGTTTCCTACTTGCTGTTAGGATCGGGAACTCAAAGATCACACTAAGAGGCGCGGTTTTCAAACCAGGACAAGCTGCTCCTGTGACGCCAGAAAATGACGTGGCACCTAATGCTGAAATGATCAAGCGAACTGAAGTTCCTTTCCCATCAGAACTTCAACCTAAACGCAGACGAAACTATGCTTTATCCCCATCAGTCCCGCAAGTTGGTGCGAGAGGCACCGTGGTCCCAGTCGTTCTCCAACCGATCAACTTATCAAACGGTTTATCAACCAATCAACCCGCTCCTCATTTGCGGACCACACAAGGGAAGCCGGTGCACTCGGTTTTGCCTTTAGCGGTTTACCCGCCGAATGGTTCAATGGGTCATGCATCTGAGTCTCAAACTAGCTCACAGTTTACCGTGACACCCACTGGGTCCGGAAATGAAAATGCTTCTTTTAAACAAGGTGATGGGGCTAATCAGCCAATAAAAGCAACTGATGGGATTGTGAAAATGGAATCAGACATTGGTGACATGAACGAGCCTCTTTTTATCGAACCTTTGCAAACTCGACACACGGTTCATCATTTTCAGTCTCCACCGGGATTGGGACCTATGATGCACAGTGGACCCGGGAAAATGACAGAGCTTTTGCAGGCTGTTCAGCAGAATGTTGGTGATGACCAGGGCCCTCGAAATGGACATCAAAATGCAGGTTATAATGTAGGTCTTAACAGAGATGAAGAAACTGGTCAGTCAGGGAAGATGTAA 948 47.68 MDPMNQEISPDASLTAPESGVVPTKDPSESEHKSSKPKRVDPINDPTEVIIGQVVTGVVEATFDAGFLLAVRIGNSKITLRGAVFKPGQAAPVTPENDVAPNAEMIKRTEVPFPSELQPKRRRNYALSPSVPQVGARGTVVPVVLQPINLSNGLSTNQPAPHLRTTQGKPVHSVLPLAVYPPNGSMGHASESQTSSQFTVTPTGSGNENASFKQGDGANQPIKATDGIVKMESDIGDMNEPLFIEPLQTRHTVHHFQSPPGLGPMMHSGPGKMTELLQAVQQNVGDDQGPRNGHQNAGYNVGLNRDEETGQSGKM 315
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05684 315 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 27 299 IPR045881 -
Chla6g05684 315 MobiDBLite consensus disorder prediction 284 315 - -
Chla6g05684 315 MobiDBLite consensus disorder prediction 284 299 - -
Chla6g05684 315 MobiDBLite consensus disorder prediction 186 218 - -
Chla6g05684 315 MobiDBLite consensus disorder prediction 25 43 - -
Chla6g05684 315 MobiDBLite consensus disorder prediction 184 222 - -
Chla6g05684 315 MobiDBLite consensus disorder prediction 1 44 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05684 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1106778 Chla Chla6g05684 Chla-Chr6:225172507 Chla6g05698 Chla-Chr6:225662296