Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05685 | ATGGGTTATGAAAGAAGATCAACAACAAAAACAGATATGAATGATGCCTTGTTATTAACAACTATGTGTCTCATTGGTTTATCTGTTGATGTTCATATTAAAGATGGCTCTGTTTATTCTGGCATTTTTCATACTGTTTCTGTTAATGATCCCTATGCTATCGTGTTGAAGCGAGCAAGGATGACCAAGAAAGGGAAATGCAGTTCAAATGTGGCCAATGAGGAGGTGATAGCCACACTAATTATCCAGTCAGAAGATCTTGTTCAAGTTGTTGCCAAGAGAGAGATGCTTCCAGCAGATGGTTTTGTTGGACATGAAACCGGGGACGTTACAGGGGCTGTTGCTTGCACCTTTCCGTCTAATGGGAACCCATTGAAAGAAACAAACAAAATGACTAACAAGTCAAATGTTGGTCAACCACATACCAATAAAACAAAAGGCTCGTCTGGAACTGAGAACGGGTTAGCTAATGGATTAAAACCCGATATCGCTGTTCAGTCAACCAATGCTCTGCAAGTAAATAAAAATGCAGACACTGTTCCTTCCGCACCTTCTGCCACCGTCTCTTCATCAACTCCATGTGAGGCCGTCACTACAAAAGTCTCAAATTCTAATCGAGCTCCTAAGGAATTTAAACTTAATCCGGGAGCAAAGACATTTTCTCCATCATTTCCAAATAAAAGATCAGCAACTCCTCAAGCAATACCATCCAGTGCAAATCTCGCATACATCCCCGACAATTATCATGTGGGTCCGGTTGCTAGTCCACAGCCGGAATTTGCAATCAACCCGTATGCTCCTCGGTCAGTGCCTGCTAAGTTTGTTCCATATGGAGGCAACGATGTACAACATCCTCCCCCTATTCTTGGATATAGGAGTCAGCCAGTTAGAAATGGTGGACAATATCATCTTCCGGTTCAAACGGCACCTGCTTATGTCCAGCCAAGCCCCCAGAATGTTATGGTTGGAAGATTGGGACCGGTTGTGTATGTTCATCCAGTTTCTCAAGACATGGTCCCGGGCACCAATGGCTTCCCTCAAATGTCTACTTGCTCTATTTTAACACCACATCAAGTCCATCATGTCCCTAAACACCAAGGAAATGCAACAGCTCAAGCTTTACAGCTGTGTGCACCTCCTTCGTTTATAGGAGGTGGTGGTCAGCCACCGTTTGTTATGCCAACTCACATTCCGATTTCACAACCGCCTTATCCTATGATCCGTCCAATCTCGGTCCCAGGGTCTAACGGCTTCTTCGTATCGAAGTTTTCTTGA | 1275 | 43.92 | MGYERRSTTKTDMNDALLLTTMCLIGLSVDVHIKDGSVYSGIFHTVSVNDPYAIVLKRARMTKKGKCSSNVANEEVIATLIIQSEDLVQVVAKREMLPADGFVGHETGDVTGAVACTFPSNGNPLKETNKMTNKSNVGQPHTNKTKGSSGTENGLANGLKPDIAVQSTNALQVNKNADTVPSAPSATVSSSTPCEAVTTKVSNSNRAPKEFKLNPGAKTFSPSFPNKRSATPQAIPSSANLAYIPDNYHVGPVASPQPEFAINPYAPRSVPAKFVPYGGNDVQHPPPILGYRSQPVRNGGQYHLPVQTAPAYVQPSPQNVMVGRLGPVVYVHPVSQDMVPGTNGFPQMSTCSILTPHQVHHVPKHQGNATAQALQLCAPPSFIGGGGQPPFVMPTHIPISQPPYPMIRPISVPGSNGFFVSKFS | 424 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05685 | 424 | MobiDBLite | consensus disorder prediction | 121 | 159 | - | - | |
| Chla6g05685 | 424 | PANTHER | ATAXIN 2-RELATED | 134 | 406 | IPR045117 | GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER) | |
| Chla6g05685 | 424 | MobiDBLite | consensus disorder prediction | 121 | 155 | - | - | |
| Chla6g05685 | 424 | MobiDBLite | consensus disorder prediction | 178 | 209 | - | - | |
| Chla6g05685 | 424 | Pfam | Ataxin 2 SM domain | 14 | 93 | IPR025852 | - | |
| Chla6g05685 | 424 | MobiDBLite | consensus disorder prediction | 219 | 233 | - | - | |
| Chla6g05685 | 424 | MobiDBLite | consensus disorder prediction | 178 | 233 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05685 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1106779 | Chla | Chla6g05685 | Chla-Chr6:225174508 | Chla6g05699 | Chla-Chr6:225665881 |