AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05707 ATGAAACCCAAACATTCATCATCGTCCTTCATTTCCAAAACCCTTATAATAATAACACTAATCATCACCTGTATGTACACTACAAACATTCCAAAAGTAGAAGGCTTTAAGGCACCAGTTGACCCACAAGACATACTCCCACTTTTGCCCAGACAAGTTTCATGGCCTATTCTGAATAAGCTTCGAAGCGCTGTCGATTTGCTTCCTAGCTTTGTTGGCTCCGCTTCGATAGCGAATAATTCGGGTCTGAGTTGGAAAGGGTCTTGTTTTTATCAAAATAGTGCTTGGTTGGAACTTCATAATAAAACTGGGAGTCAGTTTGGTGGTGGCACTCTTCATATTAAGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTGACATGGGACTATTATTTTATATCCCGTGAGCATACGCTTGAGTTCGATGAGTGGTCTGAGAAAGCTGAGTATGAATACGTAAAACGTAAGGGAGTTGCCATTTTCCTAATGCAAGCAGGGATGATAGGGACCCTAGAAGCATTGTGGGAGGTATTTCCCCTGTTTTCAAACACCGGATGGGGCGAGAATTCTAATCTTGCTTTTCTTACAAAACATATGGGAGCTAACTTTGAAGCACGTCCTGAGCCGTGGGTTACAAATATTACTGTTGATGATATACATTCTGGAGACTTTCTTGCAATATCAAAAATTCGTGGTAGATGGGGTGGGTTCGAGACACTCGAGAAATGGGTATCTGGGGCATATGCTGGTCATTCCGCTGTTTGCTTAAGGGATCCTCAAGGAAAACTATGGGTTGGGGAATCGGGGCATGAAGATGAAGAGGGTCAAGATGTTATTGCTCTGTTGCCTTGGGATGAGTGGTGGAACTTTGAGTTAACAGAAGATGATTCTAATCCTCATATTGCTCTACTTCCTTTGCATCCTGACCTTCGAGCTAAATTTAACGAGACTGCTGCATGGGAGTATGCCCAAAGCATGATTGGCTTACCATACGGTTATCACAATTTGATATTTAGCTGGATAGACACTATCAGTGATAATTTCCCTCCACCATTGGATGCTAATCTGGTTGCATCTGTTATGACCGTGTGGAATCAAATGCAGCCTGCATATGCTGCTAACATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACTAAGGGGCTCGAGCTTCCTGATATTTTAGTCGAAGTTGAAAGACGTGGTTCATCTTTTGCTGAACTATTGACCATACCTGAACAGGATGACTGGATATACGCCGACGGAAAGTCAACTTCTTGTGTTGCTTTCGCCCTAGAAATCTATATACAGATAAAGGACGCTTACACGCTTAACTTCTATGAAAACAATTCGAGTCGTCTGCCAAAGTGGTGTAATGAAGGAGACACTGTTGAGCTTCCATTTTGTCAAATCAAAGGAAAGTATCGAATGGAACTACCTGGATACAATACCATTGAACCGTATCCTCATATGACCGAACATTGCCCGTCACTGCCCCCGGACTATTCAAGGCCTGATTACTGCTGA 1557 42.65 MKPKHSSSSFISKTLIIITLIITCMYTTNIPKVEGFKAPVDPQDILPLLPRQVSWPILNKLRSAVDLLPSFVGSASIANNSGLSWKGSCFYQNSAWLELHNKTGSQFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFISREHTLEFDEWSEKAEYEYVKRKGVAIFLMQAGMIGTLEALWEVFPLFSNTGWGENSNLAFLTKHMGANFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDSNPHIALLPLHPDLRAKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNFPPPLDANLVASVMTVWNQMQPAYAANMWNEALNKRLGTKGLELPDILVEVERRGSSFAELLTIPEQDDWIYADGKSTSCVAFALEIYIQIKDAYTLNFYENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTIEPYPHMTEHCPSLPPDYSRPDYC 518
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05707 518 PANTHER OS01G0793500 PROTEIN 14 518 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05707 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1085691 Chla Chla3g01809 Chla-Chr3:68239909 Chla6g05707 Chla-Chr6:225787275
1090792 Chla Chla4g00482 Chla-Chr4:25934477 Chla6g05707 Chla-Chr6:225787275
1091476 Chla Chla4g01267 Chla-Chr4:50344943 Chla6g05707 Chla-Chr6:225787275
1159550 Chla Chla6g05693 Chla-Chr6:225556199 Chla6g05707 Chla-Chr6:225787275