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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chla6g05708	ATGAGACGAAGAGCAGGAATCGGTGGATTACAAAACGCAGCAGCAGCTAGGGATCAGTATCGATTATTAGGAGAAAATGTAGCGAAACTGAGAACTGATTTAATGAAAGAACAGCTTTCCACTTTTCGTTCCCAGTTAGAAGACTTTGCTCGTAAACATAAGAATGATATTCGCAAGAACCCTGCTTTCAGATCACAGTTTCATGAGATGTGTGCGAAAGTTGGAGTAGATCCACTAGCGTCAAATAAAGGTTTTTGGGCCGAGCTATTAGGGATCGGTGATTTCTATTATGAACTTGGGGTGCAAATTGTTGATATATGCTTAGCCACTAGACCCCATAACGGGGGTTTGATCAATTTGGAGGAACTCTGCAAGGTTCTTAGTCAGAGACGTAAGGGTGCTCGTGAGGCAGTTTCTGAAGATGATTGTTTGCGTGCAATTGGTAAACTGAAGGTGTTAGGGAGTGGTTTTGAAGTGATAACTGTTGGTAAAAGAAAGCTTGTTCGGTCCGTCCCGACTGAATTGAAGAAAGATCACAATGAAATTCTAGAGCTGTCCCAGGCTCAAGGTTTTGTGACAGTTGAAGAAGTAGAGAGACGTCTATCGTGGTCCACTGGTCGTGCCACTGATGCCCTTGAAACTTTATTAGACGAGGGCCTTGCGATGATTGATGATGGACATAGAGATGGAAAACGCCGTTATTGGTTCCCTTGTGTGTCTTCAATCTCCTCCTTTGTGGCATCTTAG	747	43.51	MRRRAGIGGLQNAAAARDQYRLLGENVAKLRTDLMKEQLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINLEELCKVLSQRRKGAREAVSEDDCLRAIGKLKVLGSGFEVITVGKRKLVRSVPTELKKDHNEILELSQAQGFVTVEEVERRLSWSTGRATDALETLLDEGLAMIDDGHRDGKRRYWFPCVSSISSFVAS	248

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chla6g05708	248	SUPERFAMILY	Winged helix DNA-binding domain	24	174	IPR036390	-
	Chla6g05708	248	PIRSF	ESCRT2-Vps22	1	245	IPR016689	GO:0000814(InterPro)\|GO:0071985(InterPro)
	Chla6g05708	248	FunFam	Vacuolar protein sorting-associated protein	172	248	-	-
	Chla6g05708	248	Gene3D	-	172	247	IPR036388	-
	Chla6g05708	248	PANTHER	EAP30 SUBUNIT OF ELL COMPLEX	1	243	IPR016689	GO:0000814(InterPro)\|GO:0000814(PANTHER)\|GO:0043328(PANTHER)\|GO:0071985(InterPro)
	Chla6g05708	248	SUPERFAMILY	Winged helix DNA-binding domain	175	239	IPR036390	-
	Chla6g05708	248	Coils	Coil	117	137	-	-
	Chla6g05708	248	FunFam	Vacuolar-sorting protein SNF8	91	171	-	-
	Chla6g05708	248	Gene3D	-	24	85	-	-
	Chla6g05708	248	Pfam	EAP30-Vps36 family	5	225	IPR040608	-
	Chla6g05708	248	Gene3D	-	91	171	IPR036388	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chla6g05708	K12188	ESCRT-II complex subunit VPS22

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1159549	Chla	Chla6g05692	Chla-Chr6:225523868	Chla6g05708	Chla-Chr6:225838052