AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05716 ATGGATGTTGAGTTTGAAACGATAGAGGCACGATTGCAATCTTTCATTAGTCAATTCCAGTCAGAAGTAGGTGTACTTGATAGAATCGTCCACAAATATAAGAACCAGCATCGCAGAAGCTCATATTTCCAATACTTGTTGAAGGTGAGGAGAGACTGTAAGCTTCTTCAGTCAACTAACTTGGTGGAACTTGTTAACTCGGCCTTTCTTGTCATTAATGGAAATCGACCTAAGCAAAAGGTGCAGCTTTTGGAAAGTTTGAAGAGAAGAAAATGTGATGGAGGCAAACATAATTTTCTGGGGCGAATTCAGGGTACCGCACGTCTACTTTCACAGATGGTTGAGCCGATGCTTAAGGCAGCTATGGAGATATCTACCTTGCTTTCTCGATCCTTTTTTATGGGATTTTCTATGACTGTGCTGGCTCTGCTTGCACGCCTTCGAGTTTTGACACAACAAATATTACTTGATGTTGTGTCAGCATTCAACATGGTTTCCTCTCTATCTCGTAAGCAGCAGTCCATCAAACTGAACCAAGAAGGAATCGAGGTTTTTAGAGAGTATTACCCAACAAATGAGCAAACTGTCTTTTTGGAGTGTGTGTGGGAAACTGATAAATTCATTTTACTTGAGAGGAAGAGTGAACCCGAGAACAAAAATCCAGATACAATAAAGGAAGATGTCATATGTCGAGGTTCATCTACAGTAGAGTATCAAAGCGTCGAAACTATTCTTGGAGAACATAAACCTATGGATATTGTAACGGAGAAGTCTTCTGAAGAAGACGTTACTACCATTAAAACAGACAATCTTTCTTCACTGGATGGTATTACTAATGATTGCAAACAAGTTGAAGCACCAAACAATGCCAAAGATCATTCGGGTTTATTAGATTCTTCCAGCAAGAACCTAGAACACGAACATCTTATGGGTTCAGATTTGGCCGTTTCATCAAGTCCCCCCAAATCTAAACCCGGATCGAAAAAGAAAGTGGCCTTCATATCGGTGAAGAGACCCGAACCTTCAAAAGCTAATGATGCAGGGCCTATTGTTAAGCCAAGTGATGGGGTCAATGGCGAGAAAGAAGATCCATTCTTTAGTTTGCTCACTGGGGGAAGCCATAAGCATAGTCTTTTTTGA 1140 40.7 MDVEFETIEARLQSFISQFQSEVGVLDRIVHKYKNQHRRSSYFQYLLKVRRDCKLLQSTNLVELVNSAFLVINGNRPKQKVQLLESLKRRKCDGGKHNFLGRIQGTARLLSQMVEPMLKAAMEISTLLSRSFFMGFSMTVLALLARLRVLTQQILLDVVSAFNMVSSLSRKQQSIKLNQEGIEVFREYYPTNEQTVFLECVWETDKFILLERKSEPENKNPDTIKEDVICRGSSTVEYQSVETILGEHKPMDIVTEKSSEEDVTTIKTDNLSSLDGITNDCKQVEAPNNAKDHSGLLDSSSKNLEHEHLMGSDLAVSSSPPKSKPGSKKKVAFISVKRPEPSKANDAGPIVKPSDGVNGEKEDPFFSLLTGGSHKHSLF 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05716 379 Pfam Nucleolus and neural progenitor protein, N-terminal 5 163 IPR027951 -
Chla6g05716 379 PANTHER OS09G0504900 PROTEIN 6 379 - -
Chla6g05716 379 MobiDBLite consensus disorder prediction 311 379 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05716 K27075 nucleolus and neural progenitor protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1087328 Chla Chla3g03752 Chla-Chr3:164468853 Chla6g05716 Chla-Chr6:226556384