Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Chla6g05729	ATGGTGTCTACTGCTAAGATCAAATCCGTTGATTTCTACAGGAAAATACCAAGAGATTTGACAGAGGCGTCACTGTCAGGTGCCAGCTTGTCTATCGTGGCCGCTCTTTCCATGATGTTTTTATTTGGAATGGAACTACATAATTATCTGAGTATCAGTACATCAACTTCTGTCATAGTTGACAGAAGTTCTGATGAGGATTACTTACGGATTGATTTCAATATTAGTTTTCCAGCTTTGTCCTGTGAGTTTGCATCTGTGGACGTGAGTGATGTACTGGGAACTAACAGGTTGAACATAACCAAAACAGTCCGCAAATATTCAATTAATAAGCATCTACAAACTACTGGCTCTGAGTTTGACTCTGGATCAGTTGGTCATGTAGTCAAGCATGGTGATGAGGCTGACGAGGATTATGGTGAAGGATCCTTAACTCTAAATTCACGTAACTTTGATAGGGTTTCTCATCAGCATTCAATTGTGGTTGTAAATTTCTATGCTCCTTGGTGCTATTGGAGTAACCGTCTGAAACCTTCATGGGAGAAGGCAGCCAAAATTATAAGAGAAAGGCATGATCCAGAAATTGATGGTCGTATTATTATGGGAAAGGTGGACTGTACTGAAGAAGTTGATCTGTGTAGAAGTCACCACATACAGGGTTATCCATCTATTCGCATATTCCGCAAGGGCAGTGATGTCAGGGATGAGCATGGGCACCACGAGCATGAGTCATATTATGGTGACCGTGATACAGAAACCTTGGTAGATACTATGGAAAAATTGGTTGCACCTATTGCAGTGGAATCCAATCTGGCCTTGGAGGATAAATCTGGCACAGCTACAGAGACTGCAAAAAGACCTGCACCGCGTGAAGCAGGATGTAGAATCGAAGGGTTTGTACGAGTCAAGAAGGTTCCTGGTAATCTTGTAATCGCGGCCCGCTCTGCAGCCCACTCCTTTGATGCTTCCCGGATGAACATGTCGCATGTAATTTCTTCATTTTCTTTTGGTAAGAAGATCACTCCAAGGGCGATGAGTGATATTAAGCGAATACTACCTTACATTGGCGTAAGCCATGACAAGTTGAATGGCAAGACATATCTCACTGACCCAGATGATCATGCAAATGTTACAGTAGAACATTATCTTCAAGTTGTAAAGACTGAGGTAATGAGGTCATCTCATCAACTGATTGAGGATTACGAGTATACAGCACATAGTAGCTTGGTACATGCTTATTCGATCCCTGTTGTGAAGTTCCATTATGAGCCATCCCCAATGCAGGTCTTAGTTACAGAAAATCCCAAATCATTTTCTCATTTCATCACCAACGTCTGTGCTATTATCGGTGGTGTTTTCACGGTTGCTGGGATACTGGATTCGATTCTGCACAATACATTGAGACTAGTGAAAAAAGTTGAACTAGGGAAGAACTTTTAG	1440	41.88	MVSTAKIKSVDFYRKIPRDLTEASLSGASLSIVAALSMMFLFGMELHNYLSISTSTSVIVDRSSDEDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKYSINKHLQTTGSEFDSGSVGHVVKHGDEADEDYGEGSLTLNSRNFDRVSHQHSIVVVNFYAPWCYWSNRLKPSWEKAAKIIRERHDPEIDGRIIMGKVDCTEEVDLCRSHHIQGYPSIRIFRKGSDVRDEHGHHEHESYYGDRDTETLVDTMEKLVAPIAVESNLALEDKSGTATETAKRPAPREAGCRIEGFVRVKKVPGNLVIAARSAAHSFDASRMNMSHVISSFSFGKKITPRAMSDIKRILPYIGVSHDKLNGKTYLTDPDDHANVTVEHYLQVVKTEVMRSSHQLIEDYEYTAHSSLVHAYSIPVVKFHYEPSPMQVLVTENPKSFSHFITNVCAIIGGVFTVAGILDSILHNTLRLVKKVELGKNF	479

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Chla6g05729	479	Pfam	Endoplasmic reticulum vesicle transporter	288	460	IPR012936	-
	Chla6g05729	479	Gene3D	Glutaredoxin	131	289	-	-
	Chla6g05729	479	SUPERFAMILY	Thioredoxin-like	138	261	IPR036249	-
	Chla6g05729	479	CDD	PDI-a-family	144	258	-	-
	Chla6g05729	479	FunFam	Protein disulfide-isomerase 5-4	131	286	-	-
	Chla6g05729	479	Pfam	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)	7	97	IPR039542	-
	Chla6g05729	479	ProSiteProfiles	Thioredoxin domain profile.	114	263	IPR013766	-
	Chla6g05729	479	PANTHER	ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN	1	473	IPR045888	GO:0005783(PANTHER)\|GO:0030134(PANTHER)
	Chla6g05729	479	Pfam	Thioredoxin	145	243	IPR013766	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Chla6g05729	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	41849	Chla2g00789	Chla6g05729
	42770	Chla5g01563	Chla6g05729

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1097622	Chla	Chla5g01563	Chla-Chr5:50748009	Chla6g05729	Chla-Chr6:227067821
	1106809	Chla	Chla6g05729	Chla-Chr6:227067821	Chla7g00332	Chla-Chr7:9328774
	1146555	Chla	Chla6g05729	Chla-Chr6:227067821	Chla2g00789	Chla-Chr2:23494466