Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05750 | ATGCAGCAACCAAACAAAACCCTTGAATCAGACCTCCCATCACTCGCCACAATCAAAGTCAAATCATCCTCCCCACGTTTCCGATCAACCACCACTTCATCAACCGACACACCAACCGCCGGAGCCCAACGTCGTATCGGCATCGCAGTCGACTTATCCGACGAATCCGCATTCGCTGTCAAATGGGCCGTTCACCAGTACCTCCGTCCCGGCGACGCCGTGATCCTAATCCACGTCCGGCCCACTTCGGTCCTTTACGGGGCCGATTGGGGCTCCGTGGATTTAGCACTTTCTGACAACGACCCAGATGAACAAACTAAAGAGAAGCTGGAAAATGACTTTGATTTGTTCACTAGTAATAAAAGTGCTGATATAGCTGGGCCGTTAGTTGAGGCCGGGATACCGTATAAGATACATATAGTGAAGGATCATGATATGAAGGAGAGGTTGTGTTTGGAAGTTGAGAGGTTGGGTTTAAGTGCTGTGATTATGGGGAGTAGGGGAGTTGGGAGGATGAGAAGCGGCGAAGGCGACGGGAGGTTAGGGAGTGTTAGTGATTATTGTGTCAGGCATTGTGTTTGTCCTGTTGTCGTTGTGAGGTTTCCTGATGAGAAAGAGGTTGCTCATGAGGGTGGGGCGGTTGTGAAAGTGGCGAAGGGGGGTGATGACGAGGAGGTGGATGAGGATGAGAGTGAGTTTCATGATGCCAGCGATGAGCGGAAATGA | 726 | 50.83 | MQQPNKTLESDLPSLATIKVKSSSPRFRSTTTSSTDTPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLALSDNDPDEQTKEKLENDFDLFTSNKSADIAGPLVEAGIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGVGRMRSGEGDGRLGSVSDYCVRHCVCPVVVVRFPDEKEVAHEGGAVVKVAKGGDDEEVDEDESEFHDASDERK | 241 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05750 | 241 | MobiDBLite | consensus disorder prediction | 21 | 42 | - | - | |
| Chla6g05750 | 241 | Pfam | Universal stress protein family | 44 | 200 | IPR006016 | - | |
| Chla6g05750 | 241 | PRINTS | Universal stress protein signature | 178 | 200 | IPR006015 | - | |
| Chla6g05750 | 241 | PRINTS | Universal stress protein signature | 43 | 61 | IPR006015 | - | |
| Chla6g05750 | 241 | MobiDBLite | consensus disorder prediction | 21 | 41 | - | - | |
| Chla6g05750 | 241 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 44 | 202 | - | - | |
| Chla6g05750 | 241 | PANTHER | OS01G0783500 PROTEIN | 6 | 241 | IPR044162 | - | |
| Chla6g05750 | 241 | MobiDBLite | consensus disorder prediction | 212 | 241 | - | - | |
| Chla6g05750 | 241 | CDD | USP-Like | 45 | 199 | - | - | |
| Chla6g05750 | 241 | Gene3D | HUPs | 32 | 210 | IPR014729 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05750 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr1:128446068 | Chla6g05750 | Chla-Chr6:228563688 | dispersed | |
| Chla | Chla-Chr6:11008615 | Chla6g05750 | Chla-Chr6:228563688 | dispersed | |
| Chla | Chla-Chr6:11190404 | Chla6g05750 | Chla-Chr6:228563688 | dispersed | |
| Chla | Chla-Chr6:228563688 | Chla7g03119 | Chla-Chr7:137047807 | dispersed | |
| Chla | Chla-Chr6:228318022 | Chla6g05750 | Chla-Chr6:228563688 | proximal |