Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05751 | ATGCGACACATCATCGCCGAAGCAAGCAACAACAAAGCGAAGCATAAGCATAAGCATATGCAAAACGCATTCCAAGAAGTGTCAATAGGATTGTACATAAGCCTCAAGAAGCCGTTTGGCTTAGATTTGCAACTACGGGACGGTATAAAAGGTTGCAATCATCACTCGGGAAGACGTTTCTTTCAGTTAAACCCCCAAATCCAAACCCTTAAAACCCTAACCAAATTCAATTTTGGCGGCAAAATTAACTCAAATGTTCACCAAATTCATTCTCCGGCCACCGTCCTTTCCTCCACCCCTCCCCTGCCTCCGCCGTTCACACTCCTCTCAAAACCACGCGCCGCCGTCACGCTCCGCCGCATCTCCGCCGTTTCATTTTCCGTCAACGGAGACGACGAAACGACACCGTACGGACCTTCATTATCCAAAGGCCACAATCCTTCACTTAAACATCAATCATCACAAAAACAAGATAATGATAACGAAGATAGTTCTTTATTAGATGAAAGTTTATTTACTCGTGTTTATGATGTGTCGGCTATTCGAGTGAGTTCGGAACGGTGTTACGCGTTAGAGAGTCAGCTGCGTGGTCATTTATTGAACTGGCCTAGAGTTAGGAACATTGCTAGAGTATCAGGTGATGAAATTGATTTGGGTTGCAAAGTATTTGAAACGAATGATGTCGAGAAGGCGTTAGATAGGAGGATTGACGGAAGAGCGGAGGAGATGTTTAGGAATTTGGCCAAGTTGTCGAGGCCGAAGAGGAAAGGGAAGGGGAAAACCGAGGTGAAGGAAGTTGGGAGAGTAAGAAAGGGTCGGGAAGTGGAGAGGTCGACAAGGTTGTTGCTTTTAGATGAGCGGTATGCGTGTAAAGCGATCGATGAATTGCCTGAGGCGATTAAGGCATGCTTAGCAGGATCACTATTTGAACTTGTGAGATGCAAGCTCACTTTGTTTTACAACTACTGGCAGATGAACGAGGTCTTAGAGGCTTTGCTTCCAAAGGGTATGATTGTTCCTTCGTCCTTTGAGACTGTTGGACATATTATTCATTTAAACTTAAGGGATGAACATCTTCCATATAAGAATGTTATAGCAAAGGTTGTTTTGGACAAAAACAAACCAAAGATACAAACAGTTGTCAATAAGATTGATGCCATCAATAATGACTTTAGAACTATGCAGCTTGAAGTTTTGGCTGGAAATCATTCTCTTGTGACAAGGGTTGTAGAAAATGGACTTCATTTACATGTTGATTTGGCATCAGTGTACTGGAGCTCAAAGCTGGCAACAGAGAGGCAAAGACTTCTAAATTGCTTTACACGGAGTGATGTTGTTTGTGACGTGTTTGCTGGGGTTGGGCCGTTAGCCATATCAGCAGCGAAAAAGGTCAAGCATGTGTATGCAAATGATTTAAATCCTCATGCAGTTGACTATATGGAAAGAAATGCTGTGCTCAACAAATTAGAAAGAAAGATTGAGGTTTTTAACATGGATGGGAGAAGGTTTATTGATGCTATCTTTAAGAGTAAAAGCTCCCGACCCATCACGCAAGTGGTAATGAATCTACCCAAAGATGCAGCTGAATATCTTGATGCATTTAAAGGAGTTTTTAGAGATGCTGACAGGAATGAAGAGTTAACTTTGCCAATGATCCATGTGTATGGTTTCTCAAAAGCTGAAGATCCAGAGTTCGATTTTCACGAGCGGATAAGAATTGCATTGTCGGAGGTGGCATTTGAAGTTAAAATGCATAAAGTACGCCTTGTTGCCCCTGGGAAGTGGATGTTGTGTGCATCATTCGTGCTCCCGGAGAGAGCTGCCCTTGCTAATCCAATCTCGGAACTGTAA | 1851 | 42.95 | MRHIIAEASNNKAKHKHKHMQNAFQEVSIGLYISLKKPFGLDLQLRDGIKGCNHHSGRRFFQLNPQIQTLKTLTKFNFGGKINSNVHQIHSPATVLSSTPPLPPPFTLLSKPRAAVTLRRISAVSFSVNGDDETTPYGPSLSKGHNPSLKHQSSQKQDNDNEDSSLLDESLFTRVYDVSAIRVSSERCYALESQLRGHLLNWPRVRNIARVSGDEIDLGCKVFETNDVEKALDRRIDGRAEEMFRNLAKLSRPKRKGKGKTEVKEVGRVRKGREVERSTRLLLLDERYACKAIDELPEAIKACLAGSLFELVRCKLTLFYNYWQMNEVLEALLPKGMIVPSSFETVGHIIHLNLRDEHLPYKNVIAKVVLDKNKPKIQTVVNKIDAINNDFRTMQLEVLAGNHSLVTRVVENGLHLHVDLASVYWSSKLATERQRLLNCFTRSDVVCDVFAGVGPLAISAAKKVKHVYANDLNPHAVDYMERNAVLNKLERKIEVFNMDGRRFIDAIFKSKSSRPITQVVMNLPKDAAEYLDAFKGVFRDADRNEELTLPMIHVYGFSKAEDPEFDFHERIRIALSEVAFEVKMHKVRLVAPGKWMLCASFVLPERAALANPISEL | 616 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05751 | 616 | FunFam | tRNA (guanine(37)-N1)-methyltransferase | 406 | 603 | - | - | |
| Chla6g05751 | 616 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 339 | 605 | IPR029063 | - | |
| Chla6g05751 | 616 | ProSiteProfiles | SAM-dependent methyltransferase TRM5-TYW2-type domain profile. | 343 | 605 | IPR030382 | - | |
| Chla6g05751 | 616 | CDD | AdoMet-MTases | 446 | 510 | - | - | |
| Chla6g05751 | 616 | MobiDBLite | consensus disorder prediction | 132 | 164 | - | - | |
| Chla6g05751 | 616 | Gene3D | - | 324 | 402 | - | - | |
| Chla6g05751 | 616 | MobiDBLite | consensus disorder prediction | 132 | 154 | - | - | |
| Chla6g05751 | 616 | PANTHER | TRNA METHYLTRANSFERASE | 176 | 606 | - | GO:0002939(PANTHER)|GO:0005737(PANTHER)|GO:0008175(PANTHER)|GO:0009019(PANTHER)|GO:0030488(PANTHER) | |
| Chla6g05751 | 616 | Pfam | Met-10+ like-protein | 342 | 540 | IPR030382 | - | |
| Chla6g05751 | 616 | Hamap | tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. | 164 | 605 | IPR025792 | GO:0030488(InterPro)|GO:0052906(InterPro) | |
| Chla6g05751 | 616 | Gene3D | Vaccinia Virus protein VP39 | 406 | 603 | IPR029063 | - | |
| Chla6g05751 | 616 | FunFam | tRNA (guanine(37)-N1)-methyltransferase | 325 | 403 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05751 | K15429 | tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr6:228588766 | Chla7g00555 | Chla-Chr7:18656144 | dispersed | |
| Chla | Chla-Chr6:228373827 | Chla6g05751 | Chla-Chr6:228588766 | proximal |