AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05782 ATGGCAGCTCGTTTGTTAGCACATGAGGTATCCGATCTTTGTCTCGGCAAGCCCTCGATCACCTCACTCCCCATCTCCGCGACCATTCACGACGCCTTAAACAAACTCAAATCATCTGAAGACACTCACATAAGTATCTGGACTTGCACCCACAACCATTTAGTATCTGATGATCATCAACTCATTAGTGAGTGCCGATGTGTTGGAAAAATATGCATGGTCGATATCATATGTTATCTTTGCAAAGAGGACAACATCACTGATCCTTCGACAGCACTTAAGTCTCCTGTTTCGGTTTTGATGTCACATGGTCGTCCTGGTGTTATTCAACATGTGGAACCATCCTTCAGTTTGCTTGAAGCAATTGATGTTATCATCAATGGTGCACAAAACCTCGTGATACCGATAAAAAACAAAACCACAAAAAGAAAACAACTTCGGCAATACCCAACGAATGCTCCTACGACTCACGTTGGTGGTCGTGAGTTTTGTTGGCTAACACAAGAAGATGTCGTTCGGTTTCTATTAAGCTCAATCGGTTTATTCTCCCTACCGCGGCTTTTTCAATCGAGTCACTTGGTATTATTACTACCGACTTCCTCACAATCAACTACCATTCGCCCGCATCAAAAGCGGTCCATGCAATCGCATCCTCTCGTGGAGCAAACATCTGGAAATATCGCCTTTACGCTAAATTATTGTGATGAAATGGTTGCGGCTGCTATTACAACGTTGTCTGCGGGGGACTTGATGGCGTATATAGATTGTGGGGGTCCACCGGAAGATATTATAAAGCTGGTGGAAGAGAGATTAAAAGAGAGGAATTTAACTGGAATGCTGGAGGAGTTTTCTGTTTACTCCTCCGGCATTCCATATTGTGGTAATAACGCGTCCTCAGATGAGGAATCGTTACCTTCACCAACCACAACTAGGTCCGGAAGGCATAATCGGTCAAGTAGCTACTCCACGAGGATAATGAGGAGGTCGGAGGCTATTGTGTGCTATCCTGGAAGCTCATTGGTTGCGGTGATGATTCAGGCGATTGCACATCGTGTAAGTTACGTGTGGGTGATTGAAGAGGATTGTAGCGTGGTCGGAATAGTGAGGTTTTGCGGCATGTTGGAAGTTTTTCGAGAACATTTAGAGCGTATGATTAACTAG 1161 44.53 MAARLLAHEVSDLCLGKPSITSLPISATIHDALNKLKSSEDTHISIWTCTHNHLVSDDHQLISECRCVGKICMVDIICYLCKEDNITDPSTALKSPVSVLMSHGRPGVIQHVEPSFSLLEAIDVIINGAQNLVIPIKNKTTKRKQLRQYPTNAPTTHVGGREFCWLTQEDVVRFLLSSIGLFSLPRLFQSSHLVLLLPTSSQSTTIRPHQKRSMQSHPLVEQTSGNIAFTLNYCDEMVAAAITTLSAGDLMAYIDCGGPPEDIIKLVEERLKERNLTGMLEEFSVYSSGIPYCGNNASSDEESLPSPTTTRSGRHNRSSSYSTRIMRRSEAIVCYPGSSLVAVMIQAIAHRVSYVWVIEEDCSVVGIVRFCGMLEVFREHLERMIN 386
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05782 386 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 23 380 IPR050511 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Chla6g05782 386 SUPERFAMILY CBS-domain pair 273 382 IPR046342 -
Chla6g05782 386 MobiDBLite consensus disorder prediction 297 322 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05782 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:15527190 Chla6g05782 Chla-Chr6:230349419 dispersed
Chla Chla-Chr6:230349419 Chla6g05987 Chla-Chr6:241226430 wgd