Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05797 | ATGAGAGGAATTATTGGTAAATTTCCATCAAGTGATGGAAATGGTGAAGTTGGTAGTGCTAATGGGATCATAAAACACAACAGAAAATGCAAAGATGTTGTGTTTCTTGTCTTTTTTATTGCTTTTTGGGTTGCTATGATTGTTAACTCAAGTTTTGGGTTTAACCAAGGAAACCCTTTAAGGCTAAACTTCGGGTTGGATTATAAAGGAAACGTATGTGGAGGCAAACACAAAGATTTTAACCTGCAAGAATTGGAACTCAAATACTATGTTAATCCTAACCAAGTTTACCAAAGTGGATCAAAGAATAGTGGATTCAAACTGTCTAATGCCCGAACAATATGTTTGTTAGATTGTCCCATACCATCAGAAGATTCTCTAAATTGGGTTTGTGATTATCCAGAGGGTGATATTCGTCTTTCATTAGATGATTGGATCGATATGAATTATGATTATTTTGCTGACCTTACTCCTGAGTTAAGAAACACTTCTCTTCAACTTCAAGGTCCTTGTTACCCTGTCATTTTTCCAAGCGTAAACGTTTACTGGACTTGCCAGTTTATTGATCGCCCATCGAACGTGTCCTTAACACATTGGAAGCAAATGAATGGTGTTACCATCAATGATGACATGGTCATAGATAAATCTATTCATAAAGCCATCAACGCCCGGTCTTCAGTTTTAAAGAGATATGTGGCTGATGTTGGAAAATCATGGCCAGTGCTGCTTGTATGCGGTGGATTCTTGCCTCTATTTCTGTCGTTGCTATGGCTTTTAATGATTCGACATTTTGTTGCTGGAATGCCATGGGTTACCGTATTTTTCTTTAATGGTCTCATAATATCAGTCACAATGTTCTACTACATGAAAGCTGGATGGATTGGAGACGACGCTATCTCGCCCATCATTGGTGAACATGATCCATACTATCATGTTTCTGCGAGGGAGCAACATCATATCCATGCTGCTGCTTTTTTCATGACATGTGTGATGATTGTTGCTGTTTTATCATCCATAGCTATTGTAAGGCGGATCCTCATGGCAACTTCAGTACTTAAGGTTGCAGCAAAGGTCATTGGAGAAGTTCATGCTCTCATAATATTTCCAGTCATACCATACCTAATCCTTGCGGTTTTTTACATGTTTTGGTTGTCAGCTGCCCTCCATCTTTTCAGTTCAGGTCAAATAGTCCGCAATGATTGCAGTACAAATTGCTGTGCTTATGATCTTAAAGCTAAAAGGGTTAGCTGTGATGATTGTTGTGGCTATAGCATCCAGTACACCCCTCATATAGCAGCTTCAATTTTATTCCACTTATTCGGGTGCTACTGGGCTACACAGTTTATCATAGCATGCTCTTCAACCGTGATTGCCGGTTCTGTAGCTTCCTACTATTGGGCTCGTGGGGAATCTTCGACAACGATTCCATTTCTTCCAGTTTTCTCGTCAATGAAGCTACTCATGCGGTACAGCCTTGGATCAGTGGCAATTGGGTCCTTGATTGTATCGTTTGTTGAGTCAACTCGCTTCATACTCGAGGCCATACGTCGCAGATTAAAAGTTGCTGACATCATGCCCGAAAGCTGGATTAAGAGGATGATGTTCCATACTTCTCGGTTCTGCTTAAAGGGTATTGAATTGACCATTAAATCTGTAAATCGAAACGCATACATTATGATTGCTATAACCGGAAAAGGGTTTTTTAGAGCTTCTGAGATGGCAACAGATTTGATAATTAGTAACATTCTACGTATAGGCAAAGTGAATGTCATCGGGGATGTTATTCTCTTTCTTGGCAAGTTGTGTGTCAGTCTTGCAAGTGCACTTTTCGCGTTTCTTATGTTGGATACTCACAAATACAAATCATCCCATAACAAGATTACATCCCCGTTATTTCCCGTGCTAGTGTGTTGGGGTCTAGGATATATAGTGGCTACCCTCTTCTTTGCAGTGGTGGAAATGTCGATTGATACCATTATCCTTTCATATTGCCAAGATGCAGAGGAGCATCAAGGAACCGCACATTATGCTCCTCCACTTTTAATTGAAACATTTGATGATCAAAATGAGGTGCAAAGAATTGGACAATGA | 2091 | 39.84 | MRGIIGKFPSSDGNGEVGSANGIIKHNRKCKDVVFLVFFIAFWVAMIVNSSFGFNQGNPLRLNFGLDYKGNVCGGKHKDFNLQELELKYYVNPNQVYQSGSKNSGFKLSNARTICLLDCPIPSEDSLNWVCDYPEGDIRLSLDDWIDMNYDYFADLTPELRNTSLQLQGPCYPVIFPSVNVYWTCQFIDRPSNVSLTHWKQMNGVTINDDMVIDKSIHKAINARSSVLKRYVADVGKSWPVLLVCGGFLPLFLSLLWLLMIRHFVAGMPWVTVFFFNGLIISVTMFYYMKAGWIGDDAISPIIGEHDPYYHVSAREQHHIHAAAFFMTCVMIVAVLSSIAIVRRILMATSVLKVAAKVIGEVHALIIFPVIPYLILAVFYMFWLSAALHLFSSGQIVRNDCSTNCCAYDLKAKRVSCDDCCGYSIQYTPHIAASILFHLFGCYWATQFIIACSSTVIAGSVASYYWARGESSTTIPFLPVFSSMKLLMRYSLGSVAIGSLIVSFVESTRFILEAIRRRLKVADIMPESWIKRMMFHTSRFCLKGIELTIKSVNRNAYIMIAITGKGFFRASEMATDLIISNILRIGKVNVIGDVILFLGKLCVSLASALFAFLMLDTHKYKSSHNKITSPLFPVLVCWGLGYIVATLFFAVVEMSIDTIILSYCQDAEEHQGTAHYAPPLLIETFDDQNEVQRIGQ | 696 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05797 | 696 | PANTHER | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) | 21 | 686 | IPR007603 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
| Chla6g05797 | 696 | Pfam | Plasma-membrane choline transporter | 326 | 668 | IPR007603 | GO:0022857(InterPro)|GO:0055085(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05797 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr4:248496302 | Chla6g05797 | Chla-Chr6:230791012 | dispersed | |
| Chla | Chla-Chr5:162413452 | Chla6g05797 | Chla-Chr6:230791012 | dispersed | |
| Chla | Chla-Chr6:15548140 | Chla6g05797 | Chla-Chr6:230791012 | dispersed | |
| Chla | Chla-Chr6:230791012 | Chla7g05564 | Chla-Chr7:248250705 | dispersed |