Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05861 | ATGACATCTCGCATCATCCTCCGTACACTCAAATCCAACCTCTTCCGTCTCCGTCCACTCACATCCATCGCCGCCGTTAACCTCCGTCAAACCGCCGTATCGGCGAACAATGTTCGTGAATACTCGACACGTCAGACGACGTCATCGTTGAACGACCCAAACCCTAACTGGTCAAACAGGCCGCCAAAAGAGACGATATTGTTAGATGGATGTGATTTTGAACATTGGCTTGTGGTTGTTGAGAAACCTGAAGGAGAGCCTACTAGAGATGAGATTATTGAGAATTATATTAATACTTTGGCTAAAGTTGTTGGAAGTTATGATGAAGCAAGGATGAAGATCTACTCGGTTTCAACAAGATGCTATTATGCTTTTGGAGCTCTTGTATCTGAAGAAGATTCTTACAAGCTTAAGGAATTACCTGGAGTTCGTTGGGTGCTCCCTGATTCTTATTTGGATGTTAAAAACAAGGATTACGGAGGTGAACCATTTATTGATGGAAAGGCTGTTCCATATGACCCAAAGTACCATGAAGAGTGGATCAGGAACAATGCTCGTGCCAATGAAAGAAACAGAAGGAATGACAGGCCTCGCAACTTTGACAGATCAAGAAATTTTGAGAGAAGAAGAGAGAACATTGGTCCGCCATCCAACATGGGAGGACCTCCACCCAACATGGGAGGACAACCACCTAACATGGGAGGAAGACCACAAGGTGGTAATATGGGTGGTCCGCCACCCAACAACTGGAATAATGGGCCACCACAACATTATGGCGGTGGGCCGCCACATATGGGAGGCGGGATGCCGCCTCAAAACAACATGGGCGGAGGAATGAGGCCTCAGAACATGGCTGGAGGGATGCCTAATAGTGCTCCTCCTAACTACCAGCAGCAGGGTCAGTATGGGTCAAATAATGGAGGAATGCCATATCAATCTGGTCCTGGGCCCAACAGTTACCCTCCCAATGTAGGTGGTGGAAATCCCTACCAGAATCAGAATGTTCCTGGAAGAGACATGCCCACATCCAACTATGAATGA | 1041 | 46.97 | MTSRIILRTLKSNLFRLRPLTSIAAVNLRQTAVSANNVREYSTRQTTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEKPEGEPTRDEIIENYINTLAKVVGSYDEARMKIYSVSTRCYYAFGALVSEEDSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNFDRSRNFERRRENIGPPSNMGGPPPNMGGQPPNMGGRPQGGNMGGPPPNNWNNGPPQHYGGGPPHMGGGMPPQNNMGGGMRPQNMAGGMPNSAPPNYQQQGQYGSNNGGMPYQSGPGPNSYPPNVGGGNPYQNQNVPGRDMPTSNYE | 346 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05861 | 346 | MobiDBLite | consensus disorder prediction | 324 | 346 | - | - | |
| Chla6g05861 | 346 | Pfam | Multiple organellar RNA editing factor 1, MORF domain | 73 | 164 | IPR054059 | - | |
| Chla6g05861 | 346 | MobiDBLite | consensus disorder prediction | 189 | 211 | - | - | |
| Chla6g05861 | 346 | MobiDBLite | consensus disorder prediction | 189 | 346 | - | - | |
| Chla6g05861 | 346 | PANTHER | MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED | 22 | 212 | IPR039206 | GO:0005739(PANTHER)|GO:0016554(InterPro)|GO:0080156(PANTHER) | |
| Chla6g05861 | 346 | MobiDBLite | consensus disorder prediction | 288 | 313 | - | - | |
| Chla6g05861 | 346 | MobiDBLite | consensus disorder prediction | 40 | 61 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05861 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr6:233857487 | Chla7g06617 | Chla-Chr7:281187842 | dispersed | |
| Chla | Chla-Chr3:240747900 | Chla6g05861 | Chla-Chr6:233857487 | transposed | |
| Chla | Chla-Chr5:276806198 | Chla6g05861 | Chla-Chr6:233857487 | transposed | |
| Chla | Chla-Chr1:70812939 | Chla6g05861 | Chla-Chr6:233857487 | wgd | |
| Chla | Chla-Chr6:233857487 | Chla6g05873 | Chla-Chr6:234094829 | wgd |