Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g05901 | ATGAAAAGTTCGATTAATGTGCTTTTAAATATCTCTGATATAGCTATGGCTACTTCTTCGCTCTTGTTTATTTTCTTATGTTTATTCATATCATTCTCAATATCGAATGCCATTGTTCCTTCGAATGAGACCTTCCGATATGTCAACCAAGGTGATTTTGCAGATTCCGAATTTAACTCTGAATACGGCCCAAACTCTGAATACACCACAACCTATCGTCCCCTTGATCTATTTACCTTCCCTTTTCAGCTTGTTTTCTACAACACCACCCCAAATGCCTATTATCTTGGTCTTCGTATGGGGTCAAGACGTGATGAATCTCTCATGCGATGGGTCTGGGAAGCCAACCGTGGCTCCCCAGTACGAGAAAATGCCACATTTTCATTAGGTTCTGATGGGAACCTTATTTTGGCCGAATCAACCGGCCAAATTGTATGGCAAACCAATACCGTCAATAAAGGCGTTTTTGGTTTTGCCATAGAGTCAGATGGTAACATCGTGCTGAAAGACTCAAGTGGCAACTTCGTATGGCAGAGTTTTGACTCACCTACCGACACTCTCTTGGTAGGCCAAACTTTAAGAGTTAACGGAGGCCCTTTCAAGCTCGTGAGTAGGGATTCAATCACTAACAACGTTAACGGAGCGTATAGTTTCGTAATAGAGCCTAAAAGACTGGCTTTGTATTATAAGAACAGCATGCGTTATTGGTCATCCACCTTCCCCGAATTAAACCCATCAAATGTGACTATAGTTAATGCAACACTACAAATTGCAGATGCCGAATATCAAGAGAACAATTTTCACGTACTTCGGTGTCGTTTAGAGAACCCTCGGCCTAACTTTGAACGACCGTCTTTACGTTTTGGAAGGATTCGATACAATAGCTCGTTATCGTATCTTCGACTAGGCATCGATGGGAACCTTAGACTCTACACTTATCTTAGAGGTGCGCGGGGAGACGCGTGGGCGTTATTGTTCACTTTGTTCGATAACGATGTAAAACCAGCAGGGGGCAGATGA | 1020 | 42.65 | MKSSINVLLNISDIAMATSSLLFIFLCLFISFSISNAIVPSNETFRYVNQGDFADSEFNSEYGPNSEYTTTYRPLDLFTFPFQLVFYNTTPNAYYLGLRMGSRRDESLMRWVWEANRGSPVRENATFSLGSDGNLILAESTGQIVWQTNTVNKGVFGFAIESDGNIVLKDSSGNFVWQSFDSPTDTLLVGQTLRVNGGPFKLVSRDSITNNVNGAYSFVIEPKRLALYYKNSMRYWSSTFPELNPSNVTIVNATLQIADAEYQENNFHVLRCRLENPRPNFERPSLRFGRIRYNSSLSYLRLGIDGNLRLYTYLRGARGDAWALLFTLFDNDVKPAGGR | 339 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g05901 | 339 | ProSiteProfiles | Bulb-type lectin domain profile. | 60 | 181 | IPR001480 | - | |
| Chla6g05901 | 339 | CDD | B-lectin | 66 | 183 | IPR001480 | - | |
| Chla6g05901 | 339 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 107 | 238 | IPR036426 | - | |
| Chla6g05901 | 339 | Gene3D | - | 78 | 182 | IPR036426 | - | |
| Chla6g05901 | 339 | SMART | blect-4 | 66 | 183 | IPR001480 | - | |
| Chla6g05901 | 339 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 82 | 323 | IPR051343 | - | |
| Chla6g05901 | 339 | Pfam | D-mannose binding lectin | 112 | 196 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g05901 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr6:236583619 | Chla6g05950 | Chla-Chr6:239573641 | dispersed | |
| Chla | Chla-Chr6:236583619 | Chla6g05903 | Chla-Chr6:236630304 | proximal | |
| Chla | Chla-Chr6:236546312 | Chla6g05901 | Chla-Chr6:236583619 | tandem |