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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g05905 ATGGACTTCCACCGTTTCTACCAAACATGGTACGAGCAGCTCCATGACCTCGTCAACCACCTCAACAAAGCCCCGAAACCACCCGCTACTGACGACGATGACCACCAGCTCACACAACTCGTTAACAAAGTCATGTTCCATTTTTCCGAATACTACCGAGTCAAGTCACTCGCTGCCAACAAAGATGTACTTTCAATATTTTCTGCGAAGTGGTCACCTATTCTCTTCGAGTCGAGAATACTAGATATTTTGCACGGGTTACGCACCGGCGACCTGGGAGACCTTTCGCCAACGCAGTTTACTCGTGTTAGTGAGTTGCAGTGTGAGACGGTAAATCAAGAAAATTCTATCTCTGACCAGCTATCCGAGTGGCAGCAGGATGAGGCAAGTGAGCTAATAGGCGGGACATGTGTAGATCTAGAGAAGAAGATCGAAAGGTTGGTGAAGATTGTGGAGAAAGCAGATGAGCTCCGTATGCGAACGTTAAAGGCAGTGGTTGAGCTACTAACGCCGCAGCAAGCAGTGGAATTTCTGATTGCTGCGGCGCAGTTACATTTTGGTATCCACCGATGGGGTTTAAATCATGACCGTGAACGTGCTGAGAAATGA 609 47.95 MDFHRFYQTWYEQLHDLVNHLNKAPKPPATDDDDHQLTQLVNKVMFHFSEYYRVKSLAANKDVLSIFSAKWSPILFESRILDILHGLRTGDLGDLSPTQFTRVSELQCETVNQENSISDQLSEWQQDEASELIGGTCVDLEKKIERLVKIVEKADELRMRTLKAVVELLTPQQAVEFLIAAAQLHFGIHRWGLNHDRERAEK 202
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g05905 202 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 2 72 IPR051886 -
Chla6g05905 202 Pfam Seed dormancy control 17 73 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Chla6g05905 202 Coils Coil 137 160 - -
Chla6g05905 202 ProSiteProfiles DOG1 domain profile. 1 198 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g05905 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:234735950 Chla6g05905 Chla-Chr6:236876221 dispersed
Chla Chla-Chr6:236876221 Chla9g05105 Chla-Chr9:203012235 dispersed
Chla Chla-Chr6:236876221 Chla9g03512 Chla-Chr9:122182999 transposed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chla6g04685 . 264 343 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 57.955 4.72e-19 79.7
Chla26936g00001 . 1 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 49.55 3.73e-87 261.0
Chla5g00771 . 16 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.961 1.21e-82 251.0
Chla8g06643 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 60.0 1.01e-17 79.0
Chla9g03512 . 13 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 56.723 2.09e-154 444.0
Chla4g05461 . 53 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 65.517 5.99e-43 140.0
Chla5g00012 . 101 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 27.193 1.99e-15 72.0
Chla9g04409 . 5 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 40.625 4.02e-24 91.3
Chla3g06128 . 112 215 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 43.269 5.80e-14 69.3
Chla9g02713 . 1 246 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 52.985 2.28e-87 258.0
Chla8g02262 . 88 141 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G13600 57.407 1.25e-11 57.4
Chla9g04218 . 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 68.966 1.39e-48 154.0
Chla2g01190 . 114 308 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.688 1.44e-10 58.9
Chla2g03486 ACH 24 365 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.693 9.88e-100 296.0
Chla2g02458 . 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 1.93e-23 97.8
Chla6g06892 ACH 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 43.333 5.08e-93 285.0
Chla6g05842 . 1 322 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 54.955 1.03e-99 295.0
Chla6g06903 . 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 37.671 3.89e-65 211.0
Chla9g04908 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 74.545 4.83e-176 489.0
Chla2g01225 . 118 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.291 3.73e-17 78.6
Chla7g02928 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 41.667 9.51e-36 127.0
Chla8g06031 . 219 257 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 69.231 8.53e-10 53.5
Chla5g02444 ACH 11 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.398 2.68e-40 132.0
Chla6g00881 . 109 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 26.066 4.11e-16 73.6
Chla6g03302 . 9 131 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 52.033 5.56e-38 124.0
Chla7g03463 . 29 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 60.432 1.11e-49 157.0
Chla8g06659 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 60.0 8.72e-18 80.5
Chla3g02250 . 21 144 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 36.29 6.03e-19 75.9
Chla7g02268 . 26 256 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 61.638 9.00e-80 243.0
Chla7g00049 . 99 238 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 50.667 2.03e-31 114.0
Chla3g06154 . 112 215 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 41.346 1.03e-12 65.9
Chla2g01765 . 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.02 4.39e-38 125.0
Chla8g04283 . 340 397 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 67.241 1.20e-18 79.7
Chla8g05586 . 147 292 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 48.993 4.46e-31 120.0
Chla2g04837 . 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 75.781 5.72e-60 181.0
Chla2g01199 . 120 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.926 7.90e-11 59.3
Chla6g01649 ACH 1 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 47.739 3.92e-97 290.0
Chla4g05009 . 95 179 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 54.118 1.40e-21 85.9
Chla7g04704 . 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.091 9.74e-46 146.0
Chla6g00807 . 129 275 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 45.503 5.41e-29 110.0
Chla2g01938 ACH 22 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 44.665 2.11e-80 249.0
Chla9g01069 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 24.365 1.09e-09 55.8
Chla9g04347 . 125 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 48.454 1.13e-21 86.3
Chla9g04222 . 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 69.828 5.96e-49 155.0
Chla7g03789 . 49 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 50.0 4.79e-21 82.8
Chla7g02669 . 35 95 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 62.295 6.32e-18 76.3
Chla2g02607 . 1 222 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 48.76 9.95e-66 202.0
Chla5g05230 . 331 405 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 64.0 5.35e-25 96.7
Chla2g01209 . 118 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.047 3.72e-15 72.8
Chla2g06012 ACH 16 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.59 5.99e-38 126.0
Chla2g01742 ACH 21 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 48.571 2.50e-39 128.0
Chla5g05206 . 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.76 8.15e-90 269.0
Chla9g01077 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 26.606 1.87e-15 73.2
Chla5g05822 . 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 55.649 4.19e-176 507.0
Chla3g05946 . 1 388 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 59.137 4.20e-144 413.0
Chla4g02892 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 57.399 4.52e-171 488.0
Chla6g01385 . 1 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 50.0 1.77e-107 319.0
Chla3g06124 . 34 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 51.331 8.71e-73 224.0
Chla5g05730 . 22 247 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 48.729 2.17e-64 198.0
Chla7g00746 . 206 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 50.0 1.97e-15 69.7
Chla6g05393 . 1 246 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 45.769 1.37e-61 192.0
Chla8g03864 . 213 293 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 49.383 6.18e-18 80.9
Chla5g02459 . 11 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.398 2.68e-40 132.0
Chla3g03278 . 118 323 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 36.17 7.45e-24 102.0
Chla2g02426 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 1.93e-23 97.8
Chla9g03488 . 13 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 58.952 1.77e-160 459.0
Chla6g03753 . 287 415 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 51.163 1.25e-32 117.0
Chla5g06162 ACH 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 61.111 0.0 593.0
Chla8g00788 . 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.011 1.40e-103 306.0
Chla5g00027 . 273 443 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 27.717 2.36e-16 75.5
Chla7g02821 . 24 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 43.112 9.68e-72 227.0
Chla4g04850 ACH 4 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 48.276 8.21e-95 286.0
Chla2g01210 . 118 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 23.305 8.84e-14 68.6
Chla6g03492 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.941 2.44e-93 277.0
Chla2g06158 . 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 49.517 1.95e-91 279.0
Chla5g00789 . 16 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.961 5.89e-83 252.0
Chla3g03254 . 118 323 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 36.17 2.18e-23 100.0
Chla6g05384 . 1 240 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 32.411 3.45e-24 94.0
Chla7g04059 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.325 1.09e-108 318.0
Chla8g06644 . 155 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 60.0 8.41e-18 80.5
Chla8g06032 . 63 258 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 29.949 2.16e-10 56.2
Chla6g06494 ACH 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 44.521 2.81e-34 115.0
Chla3g06143 . 29 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 50.923 1.60e-77 235.0
Chla26894g00008 . 146 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 49.327 1.04e-146 439.0
Chla1g02790 . 202 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.505 2.02e-22 94.7
Chla5g05217 . 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.672 3.45e-94 280.0
Chla3g00038 . 63 333 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 52.727 1.08e-83 255.0
Chla2g01194 . 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.806 3.39e-13 66.6
Chla6g05107 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 53.333 3.11e-23 97.1
Chla6g02532 . 8 142 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.037 7.77e-52 159.0
Chla5g05728 . 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 64.831 2.02e-104 302.0
Chla3g06145 . 98 215 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 38.136 1.29e-12 65.1
Chla3g06144 . 98 227 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 36.154 4.08e-13 66.6
Chla1g01256 . 73 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 41.414 2.35e-17 71.6
Chla6g05905 . 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.854 8.35e-12 61.2
Chla6g03505 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 49.544 2.73e-82 249.0
Chla8g05631 . 147 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 37.015 1.78e-40 147.0
Chla6g05202 . 106 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 36.967 5.94e-23 91.3
Chla3g06127 . 50 107 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G15830 50.0 1.11e-07 46.6
Chla3g06126 . 126 215 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 43.333 6.97e-11 56.2
Chla9g04902 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 74.242 1.16e-175 488.0
Chla9g05105 . 104 317 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 27.731 2.41e-19 84.7
Chla8g00809 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 54.667 3.23e-108 318.0