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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g06130 ATGGGCATAGCCAAGATCGCGTACCGAGCCAAACAAGGGTCTCGTGGTTGGGTGGCTTGGGCCATTAATCCAAACCAAATAGGTATGGTTGGGTCAGAGGCAATTGTGGCGTTCCATAACAGTAATGGGAGTATAACGGTTTATCCAACATTGATAACAAGTTACAGCCCGTCGATGCTTCCTGGAGATCTTAACTTTCAGGTTTCGGGTCTTTCAGCTGACTTTGTGAATGGTGAGATAACTATATATGCGACTGTGGGCCCATTTGCAGGCGGATCCCTTGTGAACCAAGTATGGCAAGCTGGGAATTTGGTTTTGAATGATGTACCGCAAATGCACGATGTTTCTCAACAGAATCTAGAATCAACAGGGGAACTTGATTTCTTGTCTAGTTAG 396 45.45 MGIAKIAYRAKQGSRGWVAWAINPNQIGMVGSEAIVAFHNSNGSITVYPTLITSYSPSMLPGDLNFQVSGLSADFVNGEITIYATVGPFAGGSLVNQVWQAGNLVLNDVPQMHDVSQQNLESTGELDFLSS 131
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g06130 131 ProSiteProfiles DOMON domain profile. 1 102 IPR005018 -
Chla6g06130 131 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 4 130 - -
Chla6g06130 131 Pfam Protein of unknown function (DUF568) 29 128 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g06130 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:246842543 Chla6g06130 Chla-Chr6:248372720 wgd