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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g06374 ATGACGTCATCAATCACCGTCGAACCATACGAAACAGTGGAATTCTCCGACTCGGATACCGACTCGTGGCAGGTTGTTGATCCGTTTGATTCCGAGAACGATGACGTCATCACTACTGAAAGTGACGTAATCACATCTGATGAAGATGAAGATGATGACGTTGATGAAGATGATGAAGAAGATGTTGATGTTGTTGTTGATGACGTCATCCCTACCGAGAGTGACGTCGTCTCATCTGAAGATGAAGAAGAAGAAGATGATGACGTCATCTCATCAGATGAAGAAGAAGATGATGATGAAGATGAAGATGACGTCATCACATCTGAAGATGAAGAAGAAGAAGAGGAGGAAGATGACGTTATCACATCTGAAGAGGAAGAAGAAGAAGATGATGACGTCATCACAACGATGTCTTCTGATGAGATCACTAATCACACTCAGGAACTTAACAAAGCCTTGGTGGAATTTGACGGTCTATACAATGTTGAGATTTCGGATTCCATGAAGGAAGACGCCTACTTTGAACGTATACAGTTGGAACATGCGTTGTATGAGGTTGAAGAAGAAGAAGAGGACGAGGACGAGGACGAGGAGGACTATGATGAGGAGGACTTGGACGACGAATTGATTCCGAGATGGTTGAATAACAAGTTTGAGAGACAAAGGATGAGGAAATTGGGGAAAAAAGTCTATCCCAAGATGAAGAAGTCGAAGCGGATGGTGAATCAGTACAATAGGCCTGGGTGTGCTGGTGCTAAGCACGGTTTGGGATTGAAGCATAACCTGATTTGA 792 43.43 MTSSITVEPYETVEFSDSDTDSWQVVDPFDSENDDVITTESDVITSDEDEDDDVDEDDEEDVDVVVDDVIPTESDVVSSEDEEEEDDDVISSDEEEDDDEDEDDVITSEDEEEEEEEDDVITSEEEEEEDDDVITTMSSDEITNHTQELNKALVEFDGLYNVEISDSMKEDAYFERIQLEHALYEVEEEEEDEDEDEEDYDEEDLDDELIPRWLNNKFERQRMRKLGKKVYPKMKKSKRMVNQYNRPGCAGAKHGLGLKHNLI 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g06374 263 PANTHER VID27-LIKE PROTEIN 105 261 - -
Chla6g06374 263 Coils Coil 179 206 - -
Chla6g06374 263 MobiDBLite consensus disorder prediction 33 136 - -
Chla6g06374 263 MobiDBLite consensus disorder prediction 1 27 - -
Chla6g06374 263 MobiDBLite consensus disorder prediction 185 208 - -
Chla6g06374 263 MobiDBLite consensus disorder prediction 1 144 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g06374 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:260664970 Chla6g06377 Chla-Chr6:260699009 proximal