AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g06608 ATGGCTTTCAGATTTGCATCCTTGGTTCTTTTTCTTCATCTTCTTCATACGTTGATGCTTGTAGAAGGAGATGGAAGTAATGTCATAAGGCTCAATACCATGGATGATCACGGTCATGATGTCCGTCAAAATGATCACATGACACAAACTGGCCATGTACATGGGCATGGGCATGGTCATGGGCATGGCCATCATTCGTCGTCGTCTACGAATCCAACAGATCCTCAACTCATGGTTTTCTACATGCTAAAAGATCTAGAAGTAGGCAAAGTCATGCCAATTCACTTTCCAAACAGACACCTTTCCCCGTCTCAACTCTTGTCCAAACAAGAAGCTGACAACATCCCCTTTTCGCTCACGGAATTACCAAACCTTCTTCGTATGTTCTCATTCCGACAAGGCTCTCCACAAGCCATAGCCATGGAAAGCACACTTCAAGAATGTGAAGTCAAGCCAATCAAGGGTGAAACCAAATTTTGTGCAACTTCTATGGAGTCTGTTCACGAATTTGCACGTGATATCTTTGGATTCGATACTCAGTTCAAAACTATGACCACAACTCACCTTAAAGATCCACCGAGTGGACTTCTACAAAACTATAAAGTTATTGAGATCTCACAAAACATACCATCTCCAAAGCTAGTGGCTTGTCACACCATGCCATACCCATATGCAGTGTTCTATTGTCATAGCCAAGAAAGCGAGAACAAAGTGCTTATGGTTACATTAGAAGGCGAAGACGGTGACATGGTCGAGGCCTTAAGTGTTTGCCACATGGACACGTCTCATTGGAGCCGTAATCATGTCTCGTTCGGCGTGCTTGGAGTTGAGCCAGGAATGACATCGGTTTGCCACTTCTTTCCTAGTGATCATTTTGTGTTTATACCTTTTTCGGCAACGATGTAA 906 43.49 MAFRFASLVLFLHLLHTLMLVEGDGSNVIRLNTMDDHGHDVRQNDHMTQTGHVHGHGHGHGHGHHSSSSTNPTDPQLMVFYMLKDLEVGKVMPIHFPNRHLSPSQLLSKQEADNIPFSLTELPNLLRMFSFRQGSPQAIAMESTLQECEVKPIKGETKFCATSMESVHEFARDIFGFDTQFKTMTTTHLKDPPSGLLQNYKVIEISQNIPSPKLVACHTMPYPYAVFYCHSQESENKVLMVTLEGEDGDMVEALSVCHMDTSHWSRNHVSFGVLGVEPGMTSVCHFFPSDHFVFIPFSATM 301
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g06608 301 MobiDBLite consensus disorder prediction 42 71 - -
Chla6g06608 301 Pfam BURP domain 79 295 IPR004873 -
Chla6g06608 301 SMART BURP-2 78 297 IPR004873 -
Chla6g06608 301 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 57 296 IPR044816 -
Chla6g06608 301 ProSiteProfiles BURP domain profile. 80 297 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g06608 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:270729043 Chla6g06611 Chla-Chr6:270957502 dispersed
Chla Chla-Chr6:270729043 Chla6g06609 Chla-Chr6:270757255 tandem