AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g06642 ATGGGAGCTCATTATAGCAAGAAATCTAATGTTGCTGGTGCTTCGGGTTCTGGTTTGGGTTCGGGTCATATAAGTCATCAGATAGTTTCAGAGCTGAATGCTTATGAAGCTGCTTGTAGATCAGATAGTGAATTGCAATCATTTGATGCTATGTTACAAGCTCGGGCGAATAATGTGATTAGTACTTTAGCTACGGGGGTCGAAGTACGGGCTATGTCGTTTGATACGTTAAAAGAAGTGACTGAATGTTTGTTGGAAATGAATCAAGAAGTTGTCAAGGTGATTTTGAATTGTAAGAAAGATATATGGAAGAATCAGGAGTTGTTTGAATTGGTGGAGGAGTATTTTGAGAATAGTTTGCAGACGCTCGATTTCTGTGCTGCGTTGGATAAGTGTTTGAAACGCGTGAGGGATAGTCAGTTGTTGATACTTGTGGCGTTGCAGCATTTTGATGAGGATGTTGAAGGTGTTGATGATAATCGGTATGAGAAGACGCTTGAGGATTTGAAAGGGTTTAAGGAGGCTGCGAAGAAAATGAAGTTGGATAAGAAAGTGAAGTATATGCAAACATGGAGGAAAGTTTCGACTGTGATATTTGTGGCTACTTTTGCGGCGGTGTTGATATGTTCTGTGGTTGCGGCTGCTATGGCTGCACCGCCATGGATCAACTCCCTTTTGAAAAACTATGAAAATGCAATTAAAGGGCAGAAGGAGATCATTAGCTCGATGCAAGTGGGTGGATTTGTGGCGATTAGGGACCTTGATACGATAAGGGTTCTTGTTGATAGACTTCAGTTGGATATAGAGGAGATGATGATGAAGGCTGATCATGTGATTGAAGGTGATGGCGAGGGTGATGAAATGGTGAAAATTGCAATCGAGGAGATAAAGGTTAAGCTTAATTCGTTTATGAAGAATGTGGATGATTTAGGGATGCAGGCTGATAATTGTAGCCGTGATGTTAGACGAGCTAGGACTGTTGTCCTGCAAAGAATTATTAAGCCGCCACATACTTAA 1017 41.3 MGAHYSKKSNVAGASGSGLGSGHISHQIVSELNAYEAACRSDSELQSFDAMLQARANNVISTLATGVEVRAMSFDTLKEVTECLLEMNQEVVKVILNCKKDIWKNQELFELVEEYFENSLQTLDFCAALDKCLKRVRDSQLLILVALQHFDEDVEGVDDNRYEKTLEDLKGFKEAAKKMKLDKKVKYMQTWRKVSTVIFVATFAAVLICSVVAAAMAAPPWINSLLKNYENAIKGQKEIISSMQVGGFVAIRDLDTIRVLVDRLQLDIEEMMMKADHVIEGDGEGDEMVKIAIEEIKVKLNSFMKNVDDLGMQADNCSRDVRRARTVVLQRIIKPPHT 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g06642 338 Pfam Protein of unknown function (DUF677) 177 332 IPR007749 -
Chla6g06642 338 Pfam Protein of unknown function (DUF677) 45 176 IPR007749 -
Chla6g06642 338 PANTHER UPF0496 PROTEIN 3-RELATED 31 174 IPR007749 -
Chla6g06642 338 MobiDBLite consensus disorder prediction 1 20 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g06642 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr5:252218343 Chla6g06642 Chla-Chr6:271723290 dispersed
Chla Chla-Chr6:100874556 Chla6g06642 Chla-Chr6:271723290 dispersed