AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g06724 ATGGCACCTCCAAAACCCACAAAACACACAATCTCCCAACAAGCCTTCGACGAAATGGTCCAGGAAAACATAACCGATCTGGGCATGGACCCAACCGAAGCCTTAGCAGACGCAATCGAAACCCTGACTTTACAAAACGTAGATCTCTCCGGTATCATCACTTCCACACTTCCAGGCCAACCCAACCCAGTCATCCAATCACTTGACAGAATCAAAGACGAGGTTCTGAAGAAAACCCATGATGATGTTGATGAGTTGGTTTTGAGTGAAATGGTGGATGAGTTGGTGGGTTTGTGTGAGGGGGAGGGGAATGTGGCGGTTTGTGGGAGGAATGGGGTGGTTGAGTTGATGTGTGAGATTTGTGGGAGGAGTGGGGGGATGGGGGTGCGGGTTTCGGCGTTGGATGCTTTGGCTTTGTTTGTTTGTGATATCCAAAGTACGGAAATATTTCGGCAGAGAGGAGGGCCGAAAATGGTGGTCGGTATTTTGAATGATGGAATTGAGAATGTGAATGTATTGAATAGTGGTTTTGCGGTTGTTGCTGCGGCTGCAACTGGTAATGAAGTTGTTAAGGAATCTTTTGTCGAGTTACACATAGATGAGTTAATGGTTAACGTGATGAGGAAGCATGGTAAAGGGAGCATCCCAAGTCTATATGATGCTATTCGAGTGCTTTTGGCAGCTGATGATAACCGAGTAGTGGCTTCACAAGTTTTTGGCTATGCTCGACAATTTGCGAAAATTGGAATTGCGGAAGCTCTTGTGGAGTCACTTAAAGATGGCCTTAGCTCGCCAAGTTTGATATCTGCAACTATTGCACTAAAGGCCATTTCAGTGAATGATGACATATGCAGATCAGTTGCTGAAAATGGCGGTATAGATTCATTACTTGTTTGTATTGATGACGCTGGTCTACAGGGGAACAGCATTGTGGCTAAAGCTTGCTGCTCCCTGTTATCGAAGTTGGCAGGAAGTGACTTTAATAAGAGCGCTATTGTTGAAAGGGGAGGGTTGAATAGGCTCATAACACTTTGTAGCAGACTTGCTGACGATCCTTCTGTCATCCAAGAGGTGATGACTATCATATGTACACTCTGCTTGCGATTGCCAGGAAATGCAACCTTAGCCATAGAAGCAGGAGCAGGAGATCTTGCAATCCAATCTATGCAGAACTTCCCTGAGGCATATCAGCTGCAGAAAAACTCTTGTCTCATGATCCGTAATCTTGTTGCCAGGAATCCAGAGAACAGGACTCTTTTGTTAGGTAATGGTATTGAGAAGATCATACGTAAGGCCAAAGAAAACCACAAAAGCTGCAAAGACGCAGCTACCGCTGCTCTTAGGGACTTGGGGCTTGATAACTACAACTCGTAG 1374 45.41 MAPPKPTKHTISQQAFDEMVQENITDLGMDPTEALADAIETLTLQNVDLSGIITSTLPGQPNPVIQSLDRIKDEVLKKTHDDVDELVLSEMVDELVGLCEGEGNVAVCGRNGVVELMCEICGRSGGMGVRVSALDALALFVCDIQSTEIFRQRGGPKMVVGILNDGIENVNVLNSGFAVVAAAATGNEVVKESFVELHIDELMVNVMRKHGKGSIPSLYDAIRVLLAADDNRVVASQVFGYARQFAKIGIAEALVESLKDGLSSPSLISATIALKAISVNDDICRSVAENGGIDSLLVCIDDAGLQGNSIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLCSRLADDPSVIQEVMTIICTLCLRLPGNATLAIEAGAGDLAIQSMQNFPEAYQLQKNSCLMIRNLVARNPENRTLLLGNGIEKIIRKAKENHKSCKDAATAALRDLGLDNYNS 457
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g06724 457 PANTHER UNCHARACTERIZED 5 54 - -
Chla6g06724 457 Gene3D - 63 457 IPR011989 -
Chla6g06724 457 SUPERFAMILY ARM repeat 66 452 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g06724 K24166 armadillo repeat-containing protein 6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr6:273874719 Chla6g06724 Chla-Chr6:274315613 wgd