AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla6g06831 ATGGGTGTCATTTTTGTTGATGTTAAGGATTATGTGGAGCTTTATTCTTCTTTTGGATGGAATTCACTTGTTGTTGTCTCTGATTTTCTTAATCCATTTTTCCCTGAGAGAGCCACATCACTTGCTTTTTCCGTCATCAATGAGCTTTTAGAGGAGTTGAGGGCTAGACCATGTCCGTTAGTCCTTGCATCCTTTTCTGGTGGTTCACAAGCTTGTATGTACAAGGTTTTTCAGATCATTGAGGGAACATGTGAAGCACATCTCAGCATGGATGATAGTCGGTTAATCATGACATGTATATCCGGTCAAATGTACGATTCTGGTCCAGTTAATGTTACTGGTGATTTGGGTGCCCGGTTTGCTTTACATTCCTCCAACGTGCCTGGTTCGTCAAAGCTGGTATCAATGGTCGCAAAAGGCGTCACGTCTGGTCTCGATGCTCTATTCCTTACTAGATTTGGATCCCAACGCTCCGAGTACTGGCAAACGCTCTACTCCTCAGTTGGTTTGGGAGCTCCGTTTCTGATATTATGTTCAGAAAGTGATGATCTTGCTCCATATCCAGTTGTATACACATTTGCTCAACAAGTACAAGGACTAGGAGGACATGTTCGGCTTTTTGGATGGAAGGACTCTCCTCATGTTGGTCACTACAAGCACAATCCCACGGAGTACAGAGCAGCTGTAAGCGAATTCTTTGACCACTCTGTTTCAATATTCAACCAAAAACTACAACAACTTGCTGAACGAACCGGCATGGAAGGTATGCACGATAAAATATGTGAATTAGTTTGCGACCTACAAAATGCTGCAGTTGACTCAAACCAGAGCCTTAGAAGAGTAGCAGTCGGACCAAATGACCACTTCTTCTTACCAAGTTCAGCTGAATATCAAAGCAGTAAAGAATCTGGATCGTTACAAGATGAGCAAAAAGAAAGAAAAGCTGTCCTTTTGGCAAGTCCGCCGAGCCTAAATCCACACAGTGTTCTTGGTCAAGTCCTGTTTGATGTTTGTGTGCCTAAAAACATCGAAGGTTGGGATATCAAGTTTGATAATAGGAAGCCGTTTGGGTCTACTTCGTAA 1083 42.84 MGVIFVDVKDYVELYSSFGWNSLVVVSDFLNPFFPERATSLAFSVINELLEELRARPCPLVLASFSGGSQACMYKVFQIIEGTCEAHLSMDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSNVPGSSKLVSMVAKGVTSGLDALFLTRFGSQRSEYWQTLYSSVGLGAPFLILCSESDDLAPYPVVYTFAQQVQGLGGHVRLFGWKDSPHVGHYKHNPTEYRAAVSEFFDHSVSIFNQKLQQLAERTGMEGMHDKICELVCDLQNAAVDSNQSLRRVAVGPNDHFFLPSSAEYQSSKESGSLQDEQKERKAVLLASPPSLNPHSVLGQVLFDVCVPKNIEGWDIKFDNRKPFGSTS 360
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla6g06831 360 MobiDBLite consensus disorder prediction 294 313 - -
Chla6g06831 360 Pfam Eukaryotic protein of unknown function (DUF829) 100 346 IPR008547 -
Chla6g06831 360 PANTHER UNCHARACTERIZED 8 241 IPR008547 -
Chla6g06831 360 SUPERFAMILY alpha-beta-Hydrolases 160 235 IPR029058 -
Chla6g06831 360 Gene3D alpha-beta hydrolase 116 248 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla6g06831 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr2:235518807 Chla6g06831 Chla-Chr6:278390185 dispersed
Chla Chla-Chr6:277130259 Chla6g06831 Chla-Chr6:278390185 dispersed
Chla Chla-Chr6:278382245 Chla6g06831 Chla-Chr6:278390185 tandem