Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla6g06911 | ATGGCGAATGTATCATCATCATCTTCTTATTCATTATTACTATTACCTCCTCCACGATTTTCTTCTTCTTCGTTGTTTTTTGCAAATCCTAATTTGAAGATGAATAATAATAATTCGATTAAACACCGATCTGATCTACGTGTCTTCTCTATGCGTCGACCCTTAAAAGCAACAGTAGTGACCGGACAGTCATGGAACACATCAGTTCTCGAAAGCAAAACACCAGTACTAGTTGAGTTCTACGCCAGTTGGTGTGGGCCATGCCAGATGGTGCACCGAGTGATTGATGAGATCGCAGGCGAGTATGCTGGTAAGGTCAAGTGTTTCGTGCTGAATGCTGACCAAGACCCACTAATCGCTGAAGAATACGACATCAAGGCTGTACCCATTGTGCTGTTATTCAAGAACGGTCAGAAATGTGAGTCGGTGGTTGGGACCATGCCTAAAGAATTCTATGTGGCTGCTATTGAAAGGGTCTTGTCATCTTCATCTTGA | 495 | 42.83 | MANVSSSSSYSLLLLPPPRFSSSSLFFANPNLKMNNNNSIKHRSDLRVFSMRRPLKATVVTGQSWNTSVLESKTPVLVEFYASWCGPCQMVHRVIDEIAGEYAGKVKCFVLNADQDPLIAEEYDIKAVPIVLLFKNGQKCESVVGTMPKEFYVAAIERVLSSSS | 164 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla6g06911 | 164 | ProSiteProfiles | Thioredoxin domain profile. | 46 | 161 | IPR013766 | - | |
| Chla6g06911 | 164 | FunFam | Thioredoxin | 52 | 163 | - | - | |
| Chla6g06911 | 164 | CDD | TRX-family | 68 | 157 | - | - | |
| Chla6g06911 | 164 | Gene3D | Glutaredoxin | 57 | 163 | - | - | |
| Chla6g06911 | 164 | PRINTS | Thioredoxin family signature | 76 | 84 | - | - | |
| Chla6g06911 | 164 | PRINTS | Thioredoxin family signature | 84 | 93 | - | - | |
| Chla6g06911 | 164 | PRINTS | Thioredoxin family signature | 124 | 135 | - | - | |
| Chla6g06911 | 164 | ProSitePatterns | Thioredoxin family active site. | 77 | 95 | IPR017937 | - | |
| Chla6g06911 | 164 | Pfam | Thioredoxin | 58 | 156 | IPR013766 | - | |
| Chla6g06911 | 164 | PANTHER | GEO12009P1 | 31 | 160 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Chla6g06911 | 164 | SUPERFAMILY | Thioredoxin-like | 58 | 162 | IPR036249 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla6g06911 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr1:90380901 | Chla6g06911 | Chla-Chr6:281636016 | dispersed | |
| Chla | Chla-Chr6:281636016 | Chla9g02412 | Chla-Chr9:78438582 | dispersed | |
| Chla | Chla-Chr6:281636016 | Chla6g06898 | Chla-Chr6:281140736 | transposed |