AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla9g03244 ATGGCTACTGGTATAAAATATAATCACGACAGGGAAATCATTCGATTAGAACCTGAAGCCGTTATTCCAATTTTGAAGCCTAGGCTCATCATGACATTGGCCAACCTCATTGAGCACAGTGCTGACCGTGGAGAGTTCTTGAAACTATGCAAAAGAGTGGAGTACACAATTCGGGCATGGTATCTTCTTCAGTTTGAAGATCTTATGGTATTATCTTCAACTATATGCACTTTTGACCCCGTCTACGGGGCTCAAAAATTGGAGCAGCAGAAGTTATCGCCCCAAGAAGTTGATGTTCTTGAACAGAATTTCCTTAACTACATGTTTAAGGTACTAGAAAAGAGTAATTTTAAGATTGCAACAAATGAAGAAATCGCGGTTGCACAATCAGGACAATATCTTCTAAATCTTCCTATCTCAGTGGATGAATCAAAACTTGATAAAAGTTTATTAACAAGGTACTTTAAGGAACATCCTCAACAAAACCTTCCCGACTTTGCAGATAAGTATATAATATTTAGACGTGGCATTGGAATTGATCGGACAACTGATTACTTTATCATGGAAAAGATTGACATGATTATTGCACGTATATGGTCATGGATCATGAGAGTAACTAGGCTAGAAAAGTTTTTTCCGAAAAAATCAAGTCCGCTAATCAAGAAAGATATAACGAAAGAAGATGAAATCACGGATGAAGAGTTAAAAGATGAGTTGTATGTTGAGCGGATCCGAATAGAAAACTTAGAGCTGAGTTTAGAGAAGTTGGCAAATAAGATAACAATACAAGAACCAACATTTGACAGGATAATTGTCGTTTACAGGCTAGCAGGCACCAAGACAAAAAAGGAACGAGGAATATACGTGAAGCATCTTAAACAAATTCCAATGGCAGACATGGAAATAGTACTCCCAGAGAAGAAAAATCCAACTTTAACCCCTATGGATTGGTTGAAGTTCCTTTCTACTGCTATTTTCGGGCTGGCAGCTGTGACTGGCTCATTTGAGACGGCTAAAGCTGACTTTTGGGTCATTGTTGCCATTGTCTCAACGGTAGTTGGTTACTGTGCCAAAGTATACTTTACGTTTCAGGCAAACATGGAAACTTATCAGAACTTGATTACACAATTCATGTATGACAAACAACTCGATAGTGGAAAAGGCACTCTTCTTCACTTGTGCGATGATGTCATTCAACAAGAAGTGAAAGAGGTGATCATTTCTTTTTTCATATTGATGGAACAAGGAAAAGCAACTTTAAAGGAACTCGACCAAAAATGTGAAGAACTGCTAAGAGAAGAGTTTGGTGAAAGATGCAACTTTGATGTGGATGATGCGGTCAACAAATTGGAAAAACTGGGCATTATTGCTAAGGATCAAATAGGAAGGTATTACACTACTGGTCTTAAACGTGCAAATGAGATTATTGGCACCACTACAGAAGAGCTGGTACTTAAGGCACGCCAGGAGGATGATGAACAAAGCCTATGCTTGAATTGTGGCATCCTTTTCTTAGCCACACACCATCGTCTCCTAGCAGTCACCACTGCAACAGTTGTTTATTATTCTTCAAGGAATTTTGTATCTGCCTTGTACTTTCAGTTTTATAAACCATTACAAATACTGGATGATTTTAATGAGAAAGATACAAATGTCAATATTCAACTATCTTAA 1674 37.87 MATGIKYNHDREIIRLEPEAVIPILKPRLIMTLANLIEHSADRGEFLKLCKRVEYTIRAWYLLQFEDLMVLSSTICTFDPVYGAQKLEQQKLSPQEVDVLEQNFLNYMFKVLEKSNFKIATNEEIAVAQSGQYLLNLPISVDESKLDKSLLTRYFKEHPQQNLPDFADKYIIFRRGIGIDRTTDYFIMEKIDMIIARIWSWIMRVTRLEKFFPKKSSPLIKKDITKEDEITDEELKDELYVERIRIENLELSLEKLANKITIQEPTFDRIIVVYRLAGTKTKKERGIYVKHLKQIPMADMEIVLPEKKNPTLTPMDWLKFLSTAIFGLAAVTGSFETAKADFWVIVAIVSTVVGYCAKVYFTFQANMETYQNLITQFMYDKQLDSGKGTLLHLCDDVIQQEVKEVIISFFILMEQGKATLKELDQKCEELLREEFGERCNFDVDDAVNKLEKLGIIAKDQIGRYYTTGLKRANEIIGTTTEELVLKARQEDDEQSLCLNCGILFLATHHRLLAVTTATVVYYSSRNFVSALYFQFYKPLQILDDFNEKDTNVNIQLS 557
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla9g03244 557 PANTHER AMINOPEPTIDASE (DUF3754) 9 491 - -
Chla9g03244 557 Coils Coil 413 433 - -
Chla9g03244 557 Pfam Protein of unknown function (DUF3754) 267 388 IPR022227 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla9g03244 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
43161 Chla8g03143 Chla9g03244
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Chla Chla-Chr8:92330206 Chla9g03244 Chla-Chr9:111538655 dispersed
Chla Chla-Chr9:111538655 Chla9g04827 Chla-Chr9:191736480 dispersed