Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chla9g03245 | ATGGCGGCGGATCAGCTGAATAAGTGTTCTAAAGTAAGCAACGTGACCCATCACACTTCTTGGGAGCTGCAGAAAACGAAGAAAGCAAAATTTTCTCATTATGAGTTAAATACACAATCAAATATTTCTCTCGAGTGGGATGACAAGAAGAAAGATGTTGTTCCTAAGAAGGAGCAGATAAGTATTGCTCGTAGAGAGTTGACACCGTTTCTTCCTCGTGTTCCACATTGCCAGAATGTCTTGGGTGATGTCTTTGCAGCTCCTTCTGAGCTATTTGAACTGAATGACTTGACTGATTTGCTGTCGTATGAGGTTTGGCAAACTCAATTGTCTGTACAAGAAAGAGAGTTTCTGACCCAGTTTCTTCCAGAAGGAGTTGACCCACATACTGTTGTAGATGACTTGTTATCTGGGAGCAATTTTTGCTTCGGAAGTCCATTCCAAAAATGGGGTACTTCAGTTTGTTCTGGTGATTGTCATCCTGATGCTGTTCTTCGTCAAGAACAGTGTAACAAGTCTAACAAAATAGCATATTATAAGGAATTGCAAGAGTACCATACCAAAATGATAGGGAGTCTGCAATTGTGGAAGGAAACATGGGCATGCTGTGTGAATCCGGAAAATGACTTTAGCCAACAGATACCGAGGCCCATGGATGAATATGACAAAAATGGTTCCTCACATCAGAAAGACATACATGGTAGTCCTGAAGATGATGTGGGTGCAACATCTGATTCTGGTTATTTCGATGCTGAAGATAAGTCATATAGTAGCAATAGCCCGGATGTAGCAATCATGAACGGAGAAACTTCAACAAGGGTCTCGAAAATGGAATCAGGGAGCAATTATTTTGACTCTTCAGTTGGATCGAAATCTGTAGCAAGATCTAGAAAAGGAGATAAATTACGCAGGCTCAGTGTAGAGTGTGGTGATGGTGCCAAATATATGTCATATATCAAGGTTAGCAAAGTTCAGCATGAACAAGTTAAAAGCAGTATGAAACACTCTAACACCGGTATCCAACAGAGGTCTCTCAGTCACGTTTTAGGCAATCTTGATAGTTTCTGTGTTATACCATATGAAGTGTTTGAAGAAGAAGAGAGACTGAAGCTGCACGAACACTGGTCTAATTTGGCAAAGAAAGATCTCCCTGCAGGCTTTGCAAATTGGAATAGTTGGCGATCTGCCAGGTGGCAGTTAGGAATATCGTTAAGGAAAGAAATGGAAGATAAAGTTAAGTCAAATGATCAACCAGTTTCAAATTTTTGTAATCAGGATGAGGAGTTAAAATATGGTGATGTTCAGGACAACATGGAACAAAACGGCTATGCAGTGCTCCATTCAGAGGCGAATCTTAATGCAGAAAACCATGAAACAGCAATGGAAGTTGAACCAAATGATCAGCCTAATCAATGCTCGCGTCAGAATCAGCATCTACCACAGATTAATGTAATACATAATGATGGCCAAAACTTCTGCTCCATGCCCATGGATGCTGCCAATGATGATGTATTGATCCAGTCAAGTGCTTTTCCTTCTAGTCTATGTGAATATCCCGCAAGTTTAAATCGTGCAGATGCATCTGTTGGTGAACAAATATGGCCTGAAGTTAGCTTACCACAAAGTGTATACTATCACCATCCGACATCTTTAAGCGATGGATACACTTCTGTTGGTGAATTGTCACTAGGCCAGTCGAGGCAACCAATTGTTCTAGAATCCGAGTTACTACAAAAGGATCCTCTTAGAAGTTTTATGCACAAAGGATCTGATGGTGGTGATTCTTTCTTTAATCCATATGCTAATCAAGACCGTAATGAATTACTACTCCAATCACTTTATAAAGATCCCGGGAATTCTCATTATCTTCATGAACAGAAGCTTTCTAGTTTATCTTTCCACCCAACCGTGAGTGACCCGATGCTGGGAACCAATCAATTTTCTAGAAATTTGTGCCCATCGATGCTAATGGATCCTGTGCTTCCGACCATTCAAGAAAACTTATATTCAGTTCCAAGGCAAGAACACTTGTTGCCAATGAATAACGTTCACGATTGGCTCGGGAATGGTGGTATTAACCTTCCCATGACATCATCATCCCATCATCGCTAA | 2112 | 40.67 | MAADQLNKCSKVSNVTHHTSWELQKTKKAKFSHYELNTQSNISLEWDDKKKDVVPKKEQISIARRELTPFLPRVPHCQNVLGDVFAAPSELFELNDLTDLLSYEVWQTQLSVQEREFLTQFLPEGVDPHTVVDDLLSGSNFCFGSPFQKWGTSVCSGDCHPDAVLRQEQCNKSNKIAYYKELQEYHTKMIGSLQLWKETWACCVNPENDFSQQIPRPMDEYDKNGSSHQKDIHGSPEDDVGATSDSGYFDAEDKSYSSNSPDVAIMNGETSTRVSKMESGSNYFDSSVGSKSVARSRKGDKLRRLSVECGDGAKYMSYIKVSKVQHEQVKSSMKHSNTGIQQRSLSHVLGNLDSFCVIPYEVFEEEERLKLHEHWSNLAKKDLPAGFANWNSWRSARWQLGISLRKEMEDKVKSNDQPVSNFCNQDEELKYGDVQDNMEQNGYAVLHSEANLNAENHETAMEVEPNDQPNQCSRQNQHLPQINVIHNDGQNFCSMPMDAANDDVLIQSSAFPSSLCEYPASLNRADASVGEQIWPEVSLPQSVYYHHPTSLSDGYTSVGELSLGQSRQPIVLESELLQKDPLRSFMHKGSDGGDSFFNPYANQDRNELLLQSLYKDPGNSHYLHEQKLSSLSFHPTVSDPMLGTNQFSRNLCPSMLMDPVLPTIQENLYSVPRQEHLLPMNNVHDWLGNGGINLPMTSSSHHR | 703 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chla9g03245 | 703 | PANTHER | NFRKB-RELATED | 1 | 432 | IPR024867 | GO:0031011(InterPro) | |
| Chla9g03245 | 703 | MobiDBLite | consensus disorder prediction | 250 | 265 | - | - | |
| Chla9g03245 | 703 | MobiDBLite | consensus disorder prediction | 211 | 265 | - | - | |
| Chla9g03245 | 703 | CDD | DEUBAD-NFRKB | 90 | 196 | - | - | |
| Chla9g03245 | 703 | ProSiteProfiles | DEUBAD (DEUBiquitinase ADaptor) domain profile. | 88 | 199 | IPR044867 | - | |
| Chla9g03245 | 703 | MobiDBLite | consensus disorder prediction | 221 | 238 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chla9g03245 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Chla | Chla-Chr9:111543197 | Chla6g03946 | Chla-Chr6:136271889 | dispersed |