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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chla9g03249 ATGGAGTCAGCAACGATAGAAGATTCGGAAATAGAATACGTGAGCTACAACGGAGAGCATCATTTACCATTAATAATGCAACTGGTTGATCAAGAATTAAGCGAACCTTATTCCATTTTCACTTATCGTTATTTTGTCTATCTCTGGCCTAACTTATCATTCCTTGCGTTTCATAAGGGGAAATGTATCGGGACGGTTGTTTCGAAGATGGGGGAGCATCGCAATACTTATAGAGGATATATTGCTATGCTCGTTGTTCTTAAACCCTATCGCCATAAAGGCATTGCTACGGAACTTGTTACTAGGTCTATTAAAGTGATGATGGAATCAGGTTGCGAAGAGGTCACATTGGAAGCAGAAGTTACAAATAAAGGAGCGCTTGCACTATATGGCCGGCTTGGTTTTATAAGAGCAAAAAGGCTATTTAGATACTACTTGAACGGCGTTGATGCATTTAGATTGAAGCTGCTATTTCCCCATCCAGAATTACCATCTTCACACCCTCATTCGTATTCTCACAATCTAATGTCATCAGTCCCTGAGATCGATGAAGATTAA 558 39.96 MESATIEDSEIEYVSYNGEHHLPLIMQLVDQELSEPYSIFTYRYFVYLWPNLSFLAFHKGKCIGTVVSKMGEHRNTYRGYIAMLVVLKPYRHKGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPHPELPSSHPHSYSHNLMSSVPEIDED 185
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chla9g03249 185 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 159 IPR000182 GO:0016747(InterPro)
Chla9g03249 185 CDD NAT-SF 53 118 - -
Chla9g03249 185 MobiDBLite consensus disorder prediction 164 185 - -
Chla9g03249 185 FunFam N-alpha-acetyltransferase MAK3 isoform A 18 170 - -
Chla9g03249 185 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 19 160 IPR016181 -
Chla9g03249 185 Gene3D - 18 174 - -
Chla9g03249 185 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 7 162 IPR044542 GO:0004596(PANTHER)|GO:0004596(InterPro)|GO:0017196(PANTHER)|GO:0017196(InterPro)|GO:0031417(PANTHER)
Chla9g03249 185 Pfam Acetyltransferase (GNAT) family 25 135 IPR000182 GO:0016747(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chla9g03249 K00670 N-alpha-acetyltransferase 30 [EC:2.3.1.256]
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Chla Acetyltransf_1 5.3e-20 CL0257 TR GNAT